Raphanus sativus (radish): 108811627
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Entry
108811627 CDS
T06014
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic
Organism
rsz
Raphanus sativus (radish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
TRCF
UPF0492
T1R_D3-like
DUF3198
RecG_dom3_C
Motif
Other DBs
NCBI-GeneID:
108811627
NCBI-ProteinID:
XP_018439197
UniProt:
A0A6J0JU54
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Position
6:complement(3510098..3514333)
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AA seq
826 aa
AA seq
DB search
MTSLLLPNHDLITTTPLVSNLRSFPPPWRFFSLRRSRNSSSSSSLPLVALSATTAAKPTT
ATRWREKHELAESDSISVLNERIRRDLGKRESGRPAMDSKEAEKYIQMVKEQQERGLQKL
KGVRPGTTTDGGGGGFSYKVDPYTLLSGDYVVHKKVGIGRFVGIKLDVPKDSSEPLEYVF
IEYADGMAKLPLKQASRLLYRYNLPNESKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVD
LMELYLHRLRQKRFPYPKNPLMSDFVAQFPYHATPDQNQAFLDVDKDLTERETPMDRLIC
GDVGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFDVISERFSLYPHIKVGLLSRF
QTKAEKEAYLEMIKHGDLNIIVGTHSLLGSRVVYSNLGLLVVDEEQRFGVKQKEKIASFK
TSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERIPIKTHLSSFRKDKVIKAIKNEL
NRGGQVFYVLPRIKGLEEVMDFLEEAFPDIDIAMAHGKQYSKQLEETMERFAQGKIKILI
CTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQA
LERLSALEECRELGQGFQLAEKDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKV
EELRIFSIPYNLVQIDININPRLPSEYVNYLENPMEIINEAEKAAEKDMWSLMQFTENLR
RQYGKEPYSMEIILKKLYVRRMAADLGVKRIYASGKMVVMKTNMSKKVFKLITDSMTCDL
YRSSLIYEGDQIMAELLLELPREQLLNWMFQCLSELHASLPALIKY
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgttgctcctcccaaatcacgacctgattacgaccacgcccctcgtttccaac
ctccgctccttccctccgccatggaggttcttctctctcagacgctcccgaaactcctcc
tcctcatcatctcttccactagtcgctctctccgcaacaactgccgcaaaacctacaacg
gctaccagatggagagagaagcacgagttagctgaaagcgattcaatatcggtcctcaac
gagaggattcggcgggacctcggaaagagagagagtggtaggccggcgatggactcaaag
gaggcggaaaagtacattcagatggtgaaggaacaacaagagaggggtctgcagaagctc
aaaggagtaaggccaggtacaaccaccgacggcggtggtggtggtttcagctacaaggtt
gacccttacactctcctttcgggtgattatgtggttcacaagaaggttggcattggccgt
tttgttggcattaagttggatgtccccaaggattcttctgagccccttgaatatgtgttt
attgagtatgctgacggcatggctaagcttcccctcaagcaggcctcccgtctcctctac
cgatacaaccttcctaatgagtcgaaacggcctcggactttaagtcggctgagtgacact
agtgtttgggaaagaagaaagaccaaaggcaaagtcgctattcagaaaatggttgttgac
ttgatggagctctatcttcacaggcttcgacagaagagatttccttatcctaaaaacccc
ctcatgtctgatttcgttgctcaatttccttatcacgctacccctgaccagaaccaggct
ttccttgatgttgacaaggatttgactgagagagaaacacctatggaccgcttgatttgt
ggagacgttggttttggtaaaactgaggttgctcttcgtgccatcttttgtgtcgtctct
tctggcaaacaagctatggttttagctcccactattgtattggccaagcaacatttcgat
gtcatctctgaacgtttttccttgtatccacatatcaaagtcggtcttttgagtcggttt
cagaccaaagcagagaaggaggcgtatttagagatgataaaacacggtgatctcaatatc
attgtaggcactcactcccttcttggaagccgtgttgtatacagcaatctaggccttctt
gtggtcgatgaggaacagagatttggtgtcaagcagaaagaaaaaattgcatctttcaaa
acgtcagtggatgtgcttaccctctccgcaacacctataccaaggactttatacttagct
ttgactggattccgggatgccagtttaatttccacaccgcctccggagaggattccaata
aaaacccatctttcatcattccgtaaggacaaggttatcaaagcaataaaaaatgagctg
aatcgtggtggccaagttttctatgtcttgcctcggattaaaggactagaggaagtgatg
gattttcttgaagaagcatttccagatatcgacattgctatggcacatgggaagcaatac
tcaaaacaactagaggaaaccatggagagatttgcgcaaggaaagatcaaaatcctcata
tgcactaatattgtggaaagcggacttgatattcaaaatgcaaataccataatcatccag
gatgttcaacaatttgggctcgctcagttgtaccagttgcgtggaagggttggccgagct
gataaagaagctcatgcctacctgttttatcctgataaatcgctgctctctgatcaagca
ctggaaaggcttagtgctcttgaagagtgtcgtgagcttggacaaggtttccaacttgcg
gagaaagacatgggtataagaggctttgggacaatttttggtgaacagcagacaggagat
gttggaaatgtcggcatcgatctcttctttgaaatgctttttgagagtctatccaaggtg
gaggaactccgtattttttcaattccatacaatctggtgcagatagacataaatataaat
cctcggctgccgtccgagtatgtaaattatctggaaaatccgatggagatcatcaatgaa
gctgagaaagcagctgagaaagacatgtggagtctgatgcaattcacagagaacttgcgt
cgccaatatgggaaagaaccttactccatggagattattttgaagaagctgtatgtgaga
cgcatggcggctgatcttggagtgaagagaatttatgcatcagggaagatggttgtgatg
aaaactaatatgagtaagaaggtgttcaagctgatcactgattctatgacttgtgacctt
taccgaagctccttgatatatgaaggagatcaaataatggcggaacttctgttggagcta
ccaagagaacagttactgaactggatgttccagtgcttgtcagaactgcatgcatcactc
cctgctcttatcaaatactaa
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