Raphanus sativus (radish): 108811742
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Entry
108811742 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108811742
KO
K21763
mitogen-activated protein kinase binding protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108811742
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
108811742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_like
NOL11_N
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
108811742
NCBI-ProteinID:
XP_018439328
UniProt:
A0A6J0JUW2
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Position
6:1260718..1266129
Genome browser
AA seq
1090 aa
AA seq
DB search
MKLSQKLKKPSSPAKLILQEIIGLTTNNANGLASLSCSSKCVYLAGCVVVVYDVDACTQS
HLLVSHRTPKTLSCVAVSHNGRFVAAGESSNLSSVLIWDCESSGLVAELKGHLYGAQCLS
FSPNGEYLVSVGGYMYLWEWRKSVLLAKVKASSICSDVTSVAFSYNGKFIVTSGNKHLKC
WTVGSFQRTRSSKVGSLAFHGKPTDGGFQKGNSFVSVISANRVSSSGSDERGEEVMSIYA
LTDAGVLMLMSCDMLIKKSVDLKVEKCFALSASSRLIACACSEGAIQLFTPETLEYSATI
HFSDARKSDNENHSHSEELKNIESQPVIYPDAVACQFSTTDKLVVIYGDHSLYVWDVNDV
NKPTRCSMMISHSAGIRDIKNLSCGNMHNPTAACVARGCCEGVSFTTCSEDGTIRLWDLD
LQMNLLEANASSNASESETKGTMHLASAGIFERDLVETCGTTFGFRALAVSEDGKYLAAG
DCGGNLHIYDLQESEYTCFTDAHEAEIQSLSFSVTGLKDLNCENASSSEFLLASGGKGGA
IHVYDVKRNFDPVGSVCGSAAVKSVKFACNGRKILTSGADRLQLFDVVRKESHVRISPSK
SQTHSHGTIHDMAVDPTSGLVVTVGQDKKINIFDTESGKLVRSFKQNREHGDAIKVILDP
SCSYLACSYSDRTICLLDFVTGELVAQATGHGEAVTGVIFLPDCKHIISVAGDGCIFVWK
LPLQMATRMIQAVNENVSLAPVTVAQPVTFVQIVGYVEEDNTNADQMQQLSPWASSFKFS
VSRLPKWAQAKVETNGTTDCKESISNQKLDDKSLVNAVDIAEECSSSKLECQTPKQGSRT
GKSCLGSLSKSSSDSEASVPQGDAPSHRKETRWNTIYNVCLDLLNSPNIQTSFIKQQKAE
TFCSKPSAEQGDMFKQFDNSLSMVDEVGADKTSQQRRYSTQFVLTKDYIGGTRQSLRTPS
QKSGYKTLRSIQEHLPLDTVNDQSSQSSEEHPEQDKASSEVFHDTLADDSLQERITSCRQ
ALNGLEAAASVFVQSMSELSTASPRDRISGELRAQLFDEAALMIPGMSQKLSEVVATMML
ERKSRTQSDG
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgagccagaaactaaagaagccttcttcaccagctaagctgattctgcaagag
ataatcggtttaaccacgaacaacgccaacggtttggcgtctctatcctgcagctccaaa
tgtgtctacttggcgggatgcgttgtggtggtctacgatgtagacgcgtgtactcaatcg
cacctcctcgtatctcaccgtacgcctaagactctgagctgtgtggcggtttcccacaac
ggccggttcgtggctgctggagagtcttcgaatctctcttcggttttgatatgggactgt
gagagttcgggacttgtggctgagctgaaaggtcacctctatggagctcagtgtctctcc
ttttcaccaaatggggagtatctggtgagtgttggaggatacatgtatctctgggagtgg
cgtaaaagcgtcttgctggcgaaggtcaaagcgagttctatttgctctgacgtcacctct
gtggcgttctcgtacaacggaaagtttattgttacttccgggaacaagcatttgaagtgc
tggacggtgggttcttttcagaggacgcggtcaagcaaagtaggatctttggcgtttcat
ggaaagcctactgatggtgggtttcagaaagggaactcgtttgtgtcggtgatatcagcc
aacagagtgagctctagtggaagcgacgaacgaggtgaagaagttatgtcaatctacgct
cttacagatgcaggtgttctgatgctcatgagttgtgatatgttgatcaagaaatcagtg
gacctgaaggttgaaaaatgttttgcgctatctgcatccagtagattgatagcatgcgct
tgcagcgagggagcgatccagctatttactcctgaaactttagaatattctgccacaata
cacttttcagatgctagaaagagcgacaatgaaaatcattctcattcagaagaacttaaa
aatatagaatctcagcctgttatctatccggatgcagttgcttgccagttttcgaccaca
gataagctcgttgtcatctatggggatcatagcctctatgtgtgggatgtaaatgatgtg
aacaagcctacaaggtgctctatgatgatatcacattctgccgggattcgggatataaaa
aacctctcttgtggaaatatgcacaatccaacagctgcatgtgtagctagagggtgctgt
gaaggagtttcctttactacatgttctgaagatggaaccataaggttatgggatcttgat
cttcaaatgaatctgttagaagctaatgcaagcagcaatgcctcagaatctgagacaaaa
gggactatgcatttagctagtgctggaatttttgaacgcgatcttgttgagacgtgtggt
actacttttggtttccgagcactagcagtaagtgaagatggaaagtacttagcagctggt
gactgtggagggaaccttcatatatatgatctacaagaatcagaatacacatgctttacg
gatgctcatgaagcagaaattcagtcactgagcttcagcgttactggactgaaagatctt
aattgtgaaaacgcctcaagcagcgaattcttgcttgcttctggtggaaagggcggagcg
atccacgtttatgatgtcaaaaggaactttgatcccgttgggagtgtttgtggttcagct
gctgtaaaatctgttaaatttgcatgtaacggccggaaaattttaacatctggtgcagat
aggttgcagttgtttgacgttgtcagaaaagaaagtcatgtgcgtatttcaccttctaaa
tctcaaactcactctcacggaaccatccatgatatggctgtagatccaacatcaggactt
gtcgtcacagtggggcaggataagaagataaatatattcgacacagaaagtggaaagctt
gtcagatcattcaagcaaaacagagaacatggagatgccataaaggtcattttggaccca
agctgcagctacttggcatgctcctactctgacaggacaatctgccttttggactttgtc
acaggagagttggttgctcaggccacaggacatggtgaagccgtgactggtgttattttc
cttcctgattgcaaacatatcatttcagttgcaggtgacggctgtatttttgtctggaaa
ctgcctttgcaaatggctactcgtatgatacaggcggtaaatgaaaatgtcagcttggct
cctgtaactgtggcccaacccgtgacgtttgtgcagatcgtgggttatgtggaggaagac
aatacaaatgcagatcaaatgcagcaactctctccatgggcatcttcatttaagttcagt
gtttctcggcttcctaagtgggcgcaagctaaagtggaaacaaatggtactaccgattgt
aaggaatccatttcaaaccagaaacttgacgataaatctctagtgaatgctgttgacatt
gctgaagaatgctcttcttcgaaacttgaatgccaaactcccaagcaaggttcaagaaca
ggaaagtcatgccttggaagcctgtccaaaagctctagtgacagtgaagcttcagtgcct
caaggagatgctcctagccataggaaggaaacgcgctggaacacaatctacaacgtgtgt
ttggatcttcttaattctccgaacatccaaacatctttcattaaacaacagaaagcagaa
actttctgcagcaaaccatctgccgaacaaggggatatgttcaagcagttcgacaacagt
ttgtcaatggtagacgaggttggagccgataaaacatcgcagcaaagaagatattctact
caatttgttcttacaaaggactacattggtggaaccagacaatctctgcgtacaccctcc
cagaaatcagggtacaagactttgagatcgatccaagaacatctccctcttgatacggtg
aatgatcaatcttcacagagctcagaagagcatcctgaacaggacaaggcctcttcagaa
gtattccatgacacgcttgcagatgattcccttcaagaaagaataacttcttgccgtcaa
gcattgaacggcttggaagctgctgcttcggttttcgtccagtcaatgtcggaattatct
acagcttctcccagagatcgaatctcaggtgaactcagagcccagttgtttgatgaagca
gctttgatgatcccaggaatgtctcagaaacttagtgaagtagttgccacgatgatgctt
gagcgcaaaagtagaacacaaagtgatggatag
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