Raphanus sativus (radish): 108811753
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Entry
108811753 CDS
T06014
Name
(RefSeq) chaperone protein ClpC2, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108811753
Chaperones and folding catalysts [BR:
rsz03110
]
Heat shock proteins
HSP100
108811753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
nSTAND3
AAA_22
TniB
UVR
NACHT
NBD_SMAX1
AAA_18
AAA_14
Mg_chelatase
Zeta_toxin
AAA_28
AAA_25
IstB_IS21
Torsin
ACT_9
DNA_pol3_delta2
Motif
Other DBs
NCBI-GeneID:
108811753
NCBI-ProteinID:
XP_018439344
UniProt:
A0A6J0JX97
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All DBs
Position
6:40303343..40307838
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AA seq
930 aa
AA seq
DB search
MARLLANPTSRSLLAPGRDFHSEDHRKPRRCVKMMMHTSQTSVLSIQSFSGLRSSNALDR
VARPSQDFFGKANLQISSRKGRGSRGVTKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGVDSSNIRTQVIRMVGENNEVTA
SVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILARRTKNNPCLIG
EPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEI
RQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDEAIQILHGLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLP
DKAIDLIDEAGSRVRLRHAQVPEEARELERQLRQITKEKNEAVRGQDFEKAGSHRDREIE
LRAEIAAVLAKGKEVNKAETEAGEEGGPTVTESDIQHIVSTWTGIPVEKVSSDESSRLLK
MEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY
YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEK
AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK
DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVVVRLKDKE
IELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDSMAEKMLSREIKDGDSVIVDVDA
EGSVVVLNGKNGSGDGFVAEEAMEDPIPVL
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggctaggctcttggctaatcctacatcccgttctttgcttgctcccggacgagacttc
cactcggaagaccacagaaaaccaagaagatgcgtgaagatgatgatgcacacttctcaa
acatccgttttgagtatccagtccttctccggtttaaggtcttccaacgcactggaccgc
gtggcaaggccgagccaagactttttcggcaaggctaacctccaaatctcgtcacggaaa
gggaggggtagccgaggtgtgacgaaagccatgtttgagcggtttaccgagaaggcgatc
aaggtcataatgctgtctcaagaggaagctcggagacttggccataactttgttggcacc
gagcagatactgttggggctgattggggaagggaccggcatcgctgcaaaggttcttaag
tccatggggatcaatcttaaagattctcgtgtggaggtggagaagatcattgggagaggg
agtgggtttgtggctgtggagatcccgtttactcctcgtgcaaagcgtgtcttggagctg
tcactagaggaagctcgacaacttgggcataactatattgggtcagagcatcttctgctt
ggacttctccgtgaaggggaaggtgttgcagctcgtgtccttgagaatttgggtgtagat
tctagcaacatccggacacaggttatacgtatggtgggagaaaacaatgaagtgacggca
agtgtgggtggaggatctagcggaaacagcaaaatgccaacactagaagagtatgggacc
aacttaactaaactagctgaagagggtaaacttgatccggttgttggaaggcagccacag
attgaaagagtggtccagatcttggctcgaagaaccaagaacaatccatgtcttattgga
gaacctggagttggtaagacagcaatagctgaaggacttgcacagaggattgccagtgga
gatgttcctgaaacaattgagggaaagactgttataacccttgacatgggtcttctagtg
gctggaacgaagtaccgtggagagtttgaagagagattgaagaagcttatggaggagatc
agacaaagtgatgacattattctgtttattgatgaagtgcacacactgatcggtgcagga
gccgctgagggcgccattgatgctgctaacatcttaaagccagctcttgcaagaggtgaa
ttgcagtgtattggtgcaacaacattggatgagtacaggaagcacattgagaaagatcct
gcgttggagagacgtttccagcctgtcaaagtacctgaaccaactgtagacgaagctatt
cagatcttgcacggtcttcgtgagcgatatgagatccaccacaagctccgatacactgat
gaagctttggttgctgctgcgcagttgtcacatcagtacatcagtgatcggtttcttccc
gacaaagccattgacttgattgatgaagctggatctcgggttaggctacgtcacgctcag
gtccctgaggaagctagagagcttgaaaggcaactcagacagatcactaaggagaagaat
gaagctgtaagaggccaagactttgagaaggctggttctcaccgtgaccgagaaatagag
cttagagccgagatagctgctgttttagccaaaggcaaagaagtgaacaaagccgagacc
gaagctggcgaagaaggaggacctactgtcaccgaatccgacatccagcacatcgtctcc
acctggacaggaatcccggtagagaaagtctcctccgatgagtctagccgtcttctcaag
atggagcagacccttcacacaagagtcattggccaagacgaagccgtcaaagctatcagc
agggccatcagacgtgcacgtgttggactcaagaacccgaaccgccccatagcgagtttc
atcttctctggtccaaccggtgtggggaaatcagagcttgccaaagccttggctgcttac
tacttcggttcagaggaagcgatgatccgtctcgacatgagtgagttcatggaacgtcac
actgtttcgaaactcatcggttcgcctcctggttacgtaggatacacggaaggtggtcag
ctaaccgaggcggttcgacgcaggccttacacgcttgtcctcttcgacgaaatcgagaaa
gctcaccctgatgttttcaacatgatgcttcagatcctagaagacgggagactaactgac
agcaaagggagaaccgttgatttcaagaacacgctacttatcatgacatcgaacgtagga
agcagcgtgattgaaaagggtggtagaagaatcgggtttgatcttgactacgacgagaaa
gacagcagctacaacaggatcaagagcttggtgactgaggaactgaaacagtatttcaga
cctgagttcttgaacaggttagatgagatgattgttttcagacagttgacgaagcttgaa
gtgaaggagattgctgatataatgcttaaagaagtggtggtgaggcttaaggacaaggag
attgagcttcaggtgaccgagaggtttaaggagagagtggtggatgaagggtttgacccg
agttacggtgcgaggccgctgagaagagcgataatgaggcttttggaagatagcatggcg
gagaagatgctttcgagggagattaaagatggagattctgtgattgttgatgttgatgct
gaaggaagtgtggttgtgttgaatggtaagaatggaagtggtgacggttttgttgctgaa
gaagccatggaggatccaattcctgtcttgtag
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