Raphanus sativus (radish): 108811862
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Entry
108811862 CDS
T06014
Name
(RefSeq) novel plant SNARE 13
KO
K08494
novel plant SNARE
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108811862
Membrane trafficking [BR:
rsz04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
108811862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
VBS_C3G9
MCPsignal
TMPIT
PigL_N
CCDC-167
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
108811862
NCBI-ProteinID:
XP_056844305
UniProt:
A0A9W3BY61
LinkDB
All DBs
Position
6:complement(5955175..5957804)
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AA seq
272 aa
AA seq
DB search
MASNLPMSPELEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRDCKRLVK
DFDRELKDEEARNPPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGA
SGEPPTTEENVQVASAMSNQELVDAGMKRMDETDQAIERSKQVVEQTIEVGTQTAANLKG
QTDQMGRVVNQLDTIQFSLKKASKLVKEIGRQVATDKCIMMFLFLIVCGVVAIIVVKIVH
PNNKDIRDIPGLAPPAPSRKLLYLRNPEYMRR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaatctcccgatgagccctgaactggaacagatccatggcgaaatccgtgac
catttccgagccctcgcgaatgggttccagaggttggataagatcaaagattcaactaga
caaagcaagcaacttgaggaacttactgacaagatgagagactgtaaaaggttggttaag
gactttgaccgtgaactcaaggacgaggaagctagaaaccctcctgaagtaaacaagcaa
ttgaacgatgagaaacaatctatgattaaggaactcaactcttatgttgcactaagaaaa
acgtatatgagtacccttggcaacaagaaagttgagctttttgatatgggagctggagcc
agcggcgaaccacctacaactgaagaaaatgttcaagtggcttcagctatgtcaaaccag
gagcttgttgatgctggaatgaaaagaatggatgagactgaccaggccattgagcgctca
aaacaggttgtagagcaaacaatcgaagttggaactcaaactgcagctaacttaaaggga
cagacggatcaaatggggcgtgtggttaaccaattggacacgattcagttctctctcaag
aaggcttccaagctagtcaaagagataggcagacaggtggcaactgataaatgcataatg
atgtttctgtttctcattgtatgtggtgttgtagccattatcgtagtgaagattgtacac
ccgaataacaaagacattagggacatcccagggttagctcctccagcgccatcaaggaag
ctactctacttgaggaatccagagtacatgcgaagatag
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