Raphanus sativus (radish): 108811908
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Entry
108811908 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108811908
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108811908
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
108811908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
108811908
NCBI-ProteinID:
XP_018439522
UniProt:
A0A6J0JV28
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Position
6:complement(52498978..52504253)
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AA seq
877 aa
AA seq
DB search
MASTGEKRHFSSISHTEAAAAAVKKQPFFWPSSEDKLDTAVLQFQNLKLSQKLEAQQVEC
SILENKLSQIKGKQSPYTSSLKSVHKSWEKLTDAVESCSIRVSSSSSGSRSSLNKEDGSS
PDIKDDFINRLLETGATESSSSNICSNGTEENTGKKASSSQVTQTLRNLVAATNDIRCIK
DELYPTVLRTGLDKDLCGHQALNELESEVKSFRVVLDDVLVKFKSLSRELQSYRDADAKV
RADLRRIRGELEDEVVELQQCNGDLSALRAERDATAGAFFPLLSPGKKLASSDKIKDKQR
DLQDMERVLKELTVLASSRLQELKDLHEERTKILEKMSILQKKSKSVRSISSSQACLSLK
DQLKKSKEAVFKYMALLEKFQVEKDSIFWKERELNIKNELVDVSRRTASVTDSRMASLDV
EIQKQLDEKTRIKTRLGNIPKERGRKEIFADMKALVSSFPGEMGSMRSQLENYKETAGGI
HSLRADVQSLSGVLCRKAKECEALHLRSAGYTSQLRDLNATVRDLKNSHEELKLFLDMFK
RESTDPRDIAEAKEEEYKAWARVESLKSSLDEQNLELRVKAANEAEAVSQQMLAAAEAEI
ADLRQKMDDCKRDVAKHSDILKSKNEEHGTYLSEIQTIGSAYEDIVPQNQQLLLQVTERD
DYNIKLFLEGITSRQMQDALLIDKYIMDKDIQQASASASFLSKRSLRIEDQMRLCTDQYQ
RLAEDRYQKSITLENLQKKRADVENGLEQARSKLEESHSKVEKSRVEYGVLELELETERF
NRRRIEEEMETAKKKVSRLRSLIEGSSATQKLRQELCEFKEILKCKACNDRPKEVVITKC
CHLFCNPCVQKITGTRQRKCPTCSASFGPNDIKPIYI
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacaggcgagaagcgtcactttagctccatatcacacacagaggctgctgca
gccgccgttaagaaacagcccttcttctggccctcctccgaagacaagcttgatactgca
gtccttcagttccaaaatctgaagctgtcacaaaagctagaggctcagcaggttgagtgt
tctattcttgaaaataagctttctcagatcaagggtaaacaatctccatacacttccagt
ttgaagtctgttcataagtcttgggaaaagcttacagatgcagtggaatcatgctccatc
cgagtgagtagttcaagcagtggatctcgtagttctctaaacaaggaggatgggtcttct
ccggatatcaaagacgatttcatcaaccggctacttgagactggtgccactgagagctcc
tcatccaatatctgctcaaatgggacggaagaaaatacagggaaaaaagcatcatcaagt
caggtgacgcaaactttgcgtaacctagtagctgcgactaatgatataaggtgtataaag
gatgaattgtatcccacagttctcagaaccggtcttgataaagatttgtgtggtcatcaa
gcgctgaatgagttggaatcagaagtcaaaagtttcagagtggttctagatgatgtactt
gtgaagttcaaatcactgtctagagaattgcagagctatcgagatgctgatgctaaagtt
agagcagaccttagacgaataagaggggagctagaggatgaggtcgtggagcttcaacaa
tgtaatggtgacttgtcggcgctgagagcggaaagggatgcaacagcaggggcgttcttc
ccgctgttgagccctggaaagaagcttgctagcagcgataagataaaggataaacaaagg
gatttgcaagacatggaaagggttctgaaagagttaacggtcctggcttcaagcaggcta
caagagctgaaagatcttcatgaagagaggacaaagattcttgaaaaaatgagcattttg
cagaagaagtcaaagtcagtgaggagcatctcatcttctcaagcatgcctttctttgaaa
gaccagctgaaaaaatctaaagaagcagtgttcaagtatatggccttacttgagaaattc
caggttgaaaaagatagtattttctggaaggaaagggaactgaatataaaaaacgaacta
gttgatgtttctcgaaggactgcttctgttactgattctagaatggcttctttagacgtg
gagatacagaaacagttggatgaaaaaacgaggatcaagactaggttgggtaacattcca
aaagagcgaggtagaaaagaaatctttgcagatatgaaggcattagtatcttcgttcccg
ggggaaatgggttctatgcgaagtcaattggaaaactataaagagactgctggtggtatt
cattctctgcgggctgatgttcagtccctctccggggttttatgtaggaaggcaaaagag
tgtgaagcgttgcatctgagatcagctggttatacttctcagctacgtgatcttaatgct
acggttcgtgatctgaagaacagtcacgaggagctaaagttgtttctggacatgtttaaa
cgcgagtcaactgatccgagggacatagctgaagccaaggaagaggagtacaaggcctgg
gctcgtgttgaaagtttgaaatcctcccttgatgagcagaatctcgaattgcgcgtcaag
gcagcaaacgaagctgaagctgtatctcaacaaatgttggctgctgcggaagctgagatc
gctgatttaagacagaaaatggatgactgtaaacgggatgttgcaaagcattctgatata
ttgaaatccaaaaatgaggaacatggaacatatctttctgaaatacagacaattggaagt
gcctacgaggacattgtaccacaaaaccaacagcttttactccaagtcacagagagggac
gactataacatcaagcttttcttggaaggcataacttcaagacagatgcaagatgctctg
ctaatagataagtacatcatggataaggatattcagcaagccagtgcatcagcgagtttc
ctctccaagagatccttaagaattgaagatcagatgaggctgtgcacagatcagtatcag
agactagcggaagatagataccaaaagtcaatcactcttgaaaatctgcaaaagaaacgt
gcagatgttgagaatggcttggaacaagctaggtcaaagcttgaggagtcgcattctaaa
gttgagaaaagtcgggtggagtatggtgtattggaactggagctggaaaccgaaaggttc
aataggagaaggatagaggaggaaatggaaacagcgaaaaagaaagtttctcgtcttagg
tctctgatagaaggatcatcagccactcaaaaactaagacaagaactctgtgaattcaaa
gagatcttgaagtgtaaggcatgcaacgatcgtccaaaagaggtggtgatcacgaaatgc
tgccatttgttttgcaacccatgtgtgcagaagatcacaggaactagacaaagaaagtgt
cctacttgctcagcaagttttggacccaacgatatcaagcctatctacatatga
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