Raphanus sativus (radish): 108811990
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Entry
108811990 CDS
T06014
Name
(RefSeq) RINT1-like protein MAG2
KO
K20474
RAD50-interacting protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108811990
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
108811990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Com_YlbF
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
108811990
NCBI-ProteinID:
XP_018439619
UniProt:
A0A6J0JY27
LinkDB
All DBs
Position
6:40837089..40839953
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AA seq
786 aa
AA seq
DB search
MDAIKPLPQVSTFSASVFSFLDDRFRDAADLSQSPGLVSQLKTEISELDQRLAGLNRRLE
SGLASYASFSDRIGGLLIGVNAKLADLSSSSTSASDGGKEEETMELPSLAKEVAQVESVR
AYAETALKLDTLVGDIEDAVMSSLNKNLRISRSSGFEEVRLHAIKTLQKTEEILSLVAKR
HPRWGRLVSAVDHRVDRALAMLRPQAIADYRALLTSLGWPPKLSNLTSSSLDSKAAEDVQ
NPLFNMEGNLKSQYCGNFHALCSLQGLQLQRKSRQLGSRKGENVLFHQPLWAIEELVNPL
TVASQRHFTKWSEKPEFIFALVYKITRDYVDSMDELLQPLVDKAKLAGYSCREEWVSAMV
SSLSLYLVKEIFPIYVGQLNETDRSSEAKVSWLHLIDLMISFDKRVQSLVSQSGILSLQE
DGNLLRISSLSVFCDRPDWLDKWAEIELDERLVKLKAEMDNERNWTLKVQDELISTSNVY
RPPIVSSILLQHLSSIIERSKSVPAIYLRARFLRLAASPTIQKFLDSLLLRCQEAEGLTA
LTEDDDLIKVSNSINAGHYIESVLEEWCEDVFFLEMGTGQENPQEGPGQENFTEPSEGIF
GEEFEKLEKFRVEWINKLSVVVLRGFDARTREYIKNRKQWQEKRDKEWTVSRALVGALDY
LQGKTSIIEENLNKADFTATWRSLASEIDKLFFSSILMANVKFSDDGVERFREDMEVLYG
VFRAWCVRPEGFFPKLSEGLTLLKMKEKQVKEGLSRGEKWLRENGVRYLSEAEAKKIAKS
RVFSQV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgatcaagccactccctcaggtctcgaccttctccgcttcagtcttcagcttc
ctcgacgacaggttcagagacgccgcggatctctcccaatcgcccggtctggtctcccaa
ctgaaaaccgagatttccgaattggatcaaagactagccggtcttaaccgccggctcgag
tccggtttagcttcctacgcttccttctccgatcgcatcggcggtctgctcatcggagtc
aacgccaaattagccgatctctcttcttcttctacctccgcgtcagatggcgggaaggag
gaggagacgatggagcttccatcactggcgaaggaggtagcacaggttgagtctgtgcgg
gcttatgctgagactgcactgaagctagacactttagtgggtgatatagaggatgctgtc
atgtcttctctcaataaaaacttgagaatttctcggtcaagtggttttgaagaagtgcgt
ctgcacgctatcaaaacactccaaaagacggaagagatactgagtttagtggcgaagagg
catcctcgttgggggcgtcttgtttctgcagttgatcatagagtggatagagctttagct
atgctgagacctcaagcgattgctgattacagagcgttgctcacttctcttgggtggccg
cctaagctttctaacttaacttcgtcgagtcttgattcgaaggcggcggaggatgtccag
aatccgcttttcaacatggaagggaacctcaaaagccagtactgtggaaacttccatgcc
ctgtgcagcctgcagggtctgcagttgcaaaggaagtcgcggcagcttgggagccgcaag
ggtgaaaatgttcttttccaccagccactctgggctattgaagagctcgttaaccctctg
acagttgcatctcagcgacattttacaaagtggagtgaaaagcctgaattcatttttgcg
cttgtgtataaaatcacaagggactatgtggactcaatggatgagttattacaaccgctt
gttgataaagcgaaactagctgggtacagttgcagagaagagtgggtttcggctatggtg
agctcactgtctttgtacttggtgaaggagatattccctatatatgttggtcagctaaac
gaaactgatcgtagttctgaggctaaggtgtcgtggctccatctcattgacctgatgatc
tcttttgataagcgagtgcagtctcttgtatcgcagtcagggatactttcgcttcaagaa
gatgggaatcttctaagaatctcctctctttcagttttctgtgacagacctgattggcta
gataaatgggcagagatagagctagatgagaggcttgtcaagttaaaggcagagatggat
aacgaaagaaactggacgttgaaggttcaagacgaactcatctctacttctaacgtttac
agaccaccaattgtttccagcatccttctgcagcacttgtcatcaataatagaacgatcc
aaatcagtgcctgccatttatttgagggcaaggttcttgagacttgcagcctcgccaaca
atccagaagttcttggatagcctccttctcaggtgccaagaagctgaaggactaactgct
ttaaccgaggatgacgatctaatcaaggtctcgaactcgatcaatgctggtcactacatt
gaatcggtcttggaagaatggtgcgaggatgtctttttcctcgaaatgggaacaggacag
gagaatccacaggaaggtcctggacaggagaactttacagaaccttctgaaggtattttc
ggagaagagtttgagaagctggagaagttcagggtagagtggataaacaagttgtctgtg
gtggtcttgagaggctttgatgcccgaactcgagagtacattaaaaacagaaagcagtgg
caggagaagagagacaaagagtggactgtgtcgagggcattagttggggctctagactac
ttgcaaggcaaaacgtcgataatagaagaaaacctaaacaaagcagactttacagctacg
tggaggagtctagcctcagagatagacaagctgttcttcagcagcatcttgatggcgaat
gtgaagttttctgatgatggagtcgaaaggtttagagaggacatggaggttctgtatggt
gttttcagggcgtggtgcgttagaccagaagggttcttccctaaactaagcgaggggcta
acgctgctgaagatgaaagagaagcaagtaaaggagggtctgagcagaggggagaagtgg
ttacgtgagaatggagttcggtatttgagtgaagccgaagccaagaagatagcaaagagt
agagtgttctctcaagtttga
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