Raphanus sativus (radish): 108811998
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Entry
108811998 CDS
T06014
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108811998
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
108811998
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
108811998
NCBI-ProteinID:
XP_018439628
UniProt:
A0A6J0JVS5
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Position
6:35178214..35185056
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AA seq
1557 aa
AA seq
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MDQSQQQRTITAPSSSRSYQFHPARAKIIDLFNLYLGRGSRQKPDEPVRDPPNKSQKRVH
APSRDLPPGNEHFIVDFQQLQTQFNDPDQLRAITESVLVTMVLQCSNHAPRAEFLLFALR
ALFRIGYVNWDTFLPSLLSSVSAAEASLNQAATAASSATTSSQSLVPVGIGSPGPSGNEQ
APVTPLAKDTAVRSSQRVRAAAVNSLRQISCKIILIGIEFNLKPITHADIFQYLMNWLVN
WDMREMGAEKSLAEWLRSCLEVIWLLVEEGKSRIPFYELLRSGLQFIENIPDDEGLFTLV
MEIHRRRDAMAMHMLMLDQHLHCPTFGTHRISSQTPANVSVEAVAHLRYSPITYPSVLGE
PLCGEDLAMSIPQGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSSQAGPIPGA
VFTSDMICEAIIDRIVELLKLTNSDANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVLR
LNGDDNHILRTNHVTWLLAQIIRVELVMTALNSDLKKVETTRKILSFHREDRTDPNNPQS
VLLDFVSSCQNLRIWSLSATTRAYLNNDQLLKGKQIDEWWRSKGERMMDYMNLDDRSIGM
FWVVSYTMAQPACETVINWLSSSGMAELPGLQPNERVMMMQEVTPLPMSLLSGFSMNLCL
KLALQMEEALFVSQVVPSIAMVETYTRLLLISPHSMFRSHFSQLAQRSASLLSKPGVTLL
VLEILNYRLLPLYRYQGKSKTLMYDVTKIISALKAKRGDHRIFRLAENLCMNLILSLRDF
FSVKREGKGPTEFTETLNRITIMTLAITIKTRGIADADHLVYLQTMLEQILATSQHTWSE
KTLRHFPSLLREALMGRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVMTYLSHSF
PQHRQYLCAGACMLMQGHPDNVNSANLARVLREVSPEEVTANIYTLVDVLLHKVHVDLQR
GHNIKEILDKHDANLAFFFWTHEMLPLDIFILALIDRDDDPHALIIAKILLERPELMQRI
NMYCANRGPPEHWLFTQVFKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVVYRL
IENNAMDTADKILTAYSHFLAYHPLRFTFVRDILAYFYGHLPGQLVVKILRVLGLSKIPF
SESFPQYISNPSSPTCPPLDYFATLLLNLVNNVIPPLSSSNCSSRSGSMADMLNTSARPL
HGKTPGASQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQI
IVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRSTCMNTASFVSRSGYT
CQQLSCLLIQACGLLLAQLPPDFHTQLYMEASRVVRETWWLTDGKRSQGELDSAVGYALM
DPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTHLIIKNLRPVTSVAMLRVVFRIMG
PLLPRLANTHALFNKTLALLLSTMVDVFGKNSQTQVPVEASQIADLIDFLHHVVHYEGQG
GAVQSSSKPRPDILALIGRAADSLRPDVQHLLSHLRTDPNSSIYAAALQNTAKTNTS
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcgcagcagcagcgcacaatcactgctccttcatcatctagatcgtaccag
tttcatcccgcgcgtgccaagatcatcgacctcttcaatctctacttagggagaggaagc
cggcaaaagcctgatgagcctgttcgagatcctccgaacaagtctcagaagcgtgttcat
gctccaagtagagacttaccacctggaaacgagcacttcattgtggacttccagcagctt
caaacccaattcaatgaccctgatcagttaagagcaatcacagagtcggttttggtaact
atggtgttacagtgtagcaaccatgcacctagagctgagtttcttctctttgccttgcgt
gcattgttcagaattggttacgttaactgggataccttcttaccatcccttctctcctcg
gtctccgctgctgaggcctcactaaaccaagcagcaacggctgcttcttctgctactact
tcttcacagtctttagttcctgtgggtattggttctccaggaccttccggtaatgaacaa
gctcctgtaactcctttggcgaaagatactgctgtgagaagtagtcaacgcgtaagagct
gcagctgtaaacagtctgcgtcagatcagttgcaagattatcttgatcggcattgagttt
aatctcaaacccatcactcatgccgacatctttcagtacttgatgaactggcttgtgaac
tgggacatgagagagatgggagctgagaagagtttggctgaatggttaaggagctgtttg
gaagtgatttggctgttggtggaagagggtaaatctcggatcccgttttatgagttactg
cgcagtggtttgcagtttatagagaacatacctgatgatgaagggttgttcactcttgtc
atggagatacaccggaggcgagatgctatggctatgcacatgctcatgttggaccaacat
ctccactgtccaacgtttggtacccatcggatctcgtctcagacacctgccaatgtttcg
gttgaagctgtggctcaccttcgctactcgcctattacttatccaagtgtacttggggaa
cctttatgtggagaggatctggcaatgtctattccacaaggaagcctggactgggagaga
gcagtgcgttgcattaggcatgctattcgaactacgccttcgccggactggtggaagcgt
gttcttgttgtggctccctgttatagaccttcttcacaagcagggcctatccctggtgct
gttttcacttctgacatgatttgtgaggcaatcattgacaggattgttgagcttcttaag
ctgaccaactcagatgcaaattgctggcaagagtggcttgttttctcagatatattcttc
ttcctaatcaaaagtggatgtactgattttgttgattttattgacaagttggtgttacgc
cttaacggtgatgataaccatattcttcgaacgaatcatgtgacgtggttgcttgcacaa
ataatacgcgtggagcttgtgatgactgctttgaactccgatcttaaaaaggtggagact
accaggaagatcttatcatttcatagggaagatagaaccgatcctaataaccctcaaagc
gtgttgcttgacttcgtaagcagttgtcagaacctacggatttggtcactaagcgcaaca
actagggcttacctaaacaatgaccagctcttgaagggaaaacagattgatgagtggtgg
agaagcaaaggagagcggatgatggattatatgaatttggatgataggtccattggcatg
ttttgggttgtttcctacaccatggcacaaccggcgtgtgaaacagttataaactggctg
tcttcttccggcatggctgagttaccagggttgcaaccaaacgaaagagtaatgatgatg
caggaagtgaccccattaccaatgtcactgttatctggcttttcaatgaacttgtgcttg
aaattagcccttcagatggaagaagctttgtttgttagccaggttgttcctagcattgca
atggttgagacatacacaaggttgctcctcatttctcctcactctatgttccgttcacat
ttcagtcaattggcccagagaagtgcttctctgctaagcaagccaggggtgactttactt
gttcttgagattctgaactatcgtttgcttcctctatacagataccaaggaaaaagcaaa
accttaatgtatgatgttactaaaataatctctgcactgaaagcaaaacgtggcgaccac
cgtatattcagactagccgaaaacttgtgcatgaatctcattttatcactcagagacttc
ttctctgttaaacgggaaggaaaagggccaacggaattcaccgagacattgaaccgcata
acaatcatgactcttgccatcacaatcaaaacacgtggaatcgcagatgctgatcacttg
gtttatctgcaaaccatgttggaacagatactcgcgacgagtcagcatacatggtcagag
aagacgctgcggcatttcccgtctcttctccgtgaggctttgatgggacgggtagacaag
agggggctatcaatccaggcttggcaacaggctgagacaactgtgataaaccagtgcact
cagcttctttcaccgtctgctgaacctgcttacgttatgacgtacctcagtcacagtttt
cctcagcaccgtcagtatctatgcgctggtgcttgtatgctgatgcaaggccaccctgat
aacgtcaacagcgctaatctggcaagggtgctgagagaggtttcacctgaagaagtcact
gctaacatatacactttggtagatgttttgcttcacaaagttcatgtagaccttcagcga
ggacacaatataaaggagattctagataagcatgatgcaaatcttgcgtttttcttctgg
acacatgaaatgcttccactcgacatttttattctggcgctcattgaccgtgatgatgat
ccccacgccttgataattgctaaaattctacttgagagaccggagcttatgcagaggatt
aacatgtactgcgcaaaccgtgggcctcctgaacactggcttttcacacaggtattcaaa
cgcaatgaactccagaaggctcttggtaaccatctttcttggaaagacaggtatccaacg
ttctttgatgatattgcggcgcgtttgcttccagttatacctctagtggtgtacaggcta
atcgagaacaatgccatggatacagctgataaaattctgactgcctactctcatttcctg
gcttatcatcctctcagattcacgtttgtccgcgacatcctcgcctatttctacggtcat
cttcccggtcaacttgttgtgaagattctcagagtccttggtctcagcaagattccattc
tctgaatcattccctcagtacatcagcaacccaagttcccctacatgccctcctcttgat
tacttcgccactcttttgttgaatctcgtaaacaacgtcatacctccacttagcagcagc
aactgtagctcaaggtctggctcaatggcggacatgttaaacacctcagcgagacctctt
catgggaaaactccaggagcatctcagcccggaccagcaaacgcctctgagggacagaaa
gctttctatcagatccaagaccctggaacttacactcaactggttctcgaaacggctgtg
atcgagatcctctctcttcctgtctcagcttctcagattgtctcctctcttgtccagata
atcgtcaacatacagtccacgcttattcaatccggcaacggcttccacggcgctgcaaac
ggagtggggcaaggctcggtactgcctacgtctccctcgggagggagcactgactccatg
agcgcaagccggtctacttgtatgaacacagcgagctttgtctctagaagcggttacaca
tgtcaacagctgtcgtgtctgttgattcaagcttgcgggcttctgcttgctcagctccct
ccagattttcacacgcagctttacatggaggcttcacgtgtggtaagggaaacgtggtgg
cttactgacgggaagagatcacaaggtgagctagactcggctgttggatatgctctgatg
gatcctacatgggctgctcaggacaacacctcaaccgccattgggaatatagtggccttg
cttcacgctttcttcagcaatctcccacaagaatggcttgatggcacgcatctcatcatc
aagaacctccggcctgtgacatctgttgcaatgcttagagtcgtattccgtattatggga
ccacttcttcccaggcttgctaacacccatgcgctctttaacaagacgctagcccttctc
ttgagcacaatggtagatgttttcggaaaaaactcgcagacacaggtccctgttgaagca
tcccagattgcagatcttatcgatttcctacaccatgttgttcactacgagggacaagga
ggagcagttcaaagtagcagcaagccgagaccagacatattggctttaatcggaagagca
gcagattctctccgacctgatgtacaacaccttctctctcacctcagaaccgatcccaat
tcgtctatatatgctgctgctcttcagaataccgcaaagaccaacacctcttag
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