Raphanus sativus (radish): 108812062
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Entry
108812062 CDS
T06014
Name
(RefSeq) glutamine--tRNA ligase, cytoplasmic
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108812062
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108812062
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108812062
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
108812062
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class I (A)
108812062
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108812062
Prokaryotic type
Other AARSs
108812062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C
tRNA-synt_1c_C2
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
108812062
NCBI-ProteinID:
XP_018439714
UniProt:
A0A6J0JYD2
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All DBs
Position
1:11433128..11438307
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AA seq
793 aa
AA seq
DB search
MAPKDENSVKLFLSIGLDEKTATTTINNPKVTANLTAVIHEAGVTDGCDRTTGNLLYTVA
TKHHSNLRLHRPTLFDYIVSSKIKTPAQLDAAVSFFDKNSPEDFKLNEFEEACGVGVEVS
AEDIEKAAEEVFEEHKSAILEQRYRTNVGQLLGHVRKSLPWADPKIVKDVIDRKMYELLG
EKTAADNEKPTKKKEKKEKPAAKAEEKKAAVEATPEPSEEELNPYSIFPQPEQNLMVHTE
VFYSDGSVLKCNNKKEVLDKHLKVTGGKVYTRFPPEPNGYLHIGHAKAMFVDFGLAKERG
GCCYLRYDDTNPEAEKKEYINHIEEIVSWMGWEPFKITYTSDYFQELYDLAVELIRRGHA
YVDHQNADEIKEYREKKMNSPWRDRPIEESLRLFDDMRRGKIEEGKATLRMKQDMQNDNC
NMYDLIAYRIKFTPHPHAGDKWCIYPSYDFAHCTVDSLENITHSLCTLEFETRRASYYWL
LHSLDLYMPYVWEYSRLNITNTVMSKRKLNYIVTNNHVDGWDDPRLLTLAGLRRRGVTPT
AINAFVRGMGITRSDGSMIHVSRLEHHIREELNKTAPRTMVVLNPLKVVITNLESDKVIE
LDAKRWPDAQNDDPSAFYKVPFSRVVYIDQSDFRMKDSKDYYGLAPGKSVLLRYGFPIKC
TNVVFADDNETIREIHAEYDPEKKTKPKGVLHWVAESSPGKEPIKVEVRLFEKLFNSENP
AELNDDWLTDINPNSKVVVSDAYAVSILKDAAVGDRFQFERLGYFAVDKDSEPGKLVFNR
TVTLRDSYGKGGK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaagacgagaactctgtgaagctcttcctcagcatcggcctggacgagaaa
acagccaccactaccatcaacaaccccaaggtcaccgctaatctcaccgccgttattcac
gaggctggtgtaactgatggatgcgatcgaactactgggaatctattgtacacggtcgct
actaagcaccattcaaatcttcgtctgcaccgtcctacattgttcgactacattgtttcc
tccaagattaaaactccagcgcaattggatgctgcagtttcgttttttgacaagaactct
ccagaggacttcaagctaaatgagtttgaggaggcgtgtggtgttggggttgaagtttct
gcagaagatatcgagaaagcagctgaagaagtttttgaagagcataagagtgcaatattg
gagcagcgctaccgaactaatgtgggtcagttgcttggacatgtccggaaaagtttgcca
tgggcagatcctaagattgtcaaggacgtcatagacagaaaaatgtatgaactgcttggt
gagaaaactgctgcggataatgaaaaacctacaaaaaagaaggaaaagaaagagaaacct
gctgccaaagctgaggaaaagaaagctgccgtggaagccaccccagagccatcagaagag
gagcttaatccatattccatattccctcagccagagcaaaatttgatggttcacacagaa
gtcttttatagcgacggctctgtgctcaaatgtaacaataagaaggaagtgcttgataaa
catctcaaggtgactggagggaaggtctatacccggttcccacctgaaccaaatggttat
ctacatattggacatgcaaaggctatgtttgtcgattttggtcttgcaaaggagcgaggg
ggctgctgttatctaagatatgatgacactaatcccgaagcagaaaagaaagagtacatt
aatcacattgaagaaattgttagctggatgggttgggaacccttcaagattacgtacacc
agtgattatttccaagaattgtatgatttggcagtcgaattgattcggagaggtcatgct
tatgttgatcatcagaatgctgacgagataaaagagtacagagagaagaaaatgaatagc
ccctggagagacaggcctattgaagaatctcttagactttttgacgatatgaggcgagga
aagattgaggaagggaaagcaactctgcgaatgaagcaggatatgcagaatgataattgc
aatatgtatgaccttattgcctatcgtattaagttcacacctcatcctcatgctggtgac
aaatggtgcatctacccgagctacgattttgcgcactgcactgttgactctctcgagaat
ataacacattcgctctgtactcttgaattcgagactcgacgggcttcatattactggtta
ttacattccctggatctctacatgccgtatgtgtgggaatattcacggttgaatatcaca
aatactgtaatgtccaagcgtaagttgaactacattgtgacaaacaatcatgttgatggg
tgggatgatccacgtcttttgacacttgctggtctgagacgaaggggtgtaactcctact
gcgatcaatgcttttgtacgaggaatgggaattaccagaagtgatggtagcatgatacat
gtgagtcgtcttgagcatcatatcagagaagagttgaataaaacggctccccgcactatg
gtggtgcttaatccccttaaagtggtcatcactaatttggaatcagacaaggttattgag
cttgacgccaaaaggtggcctgatgctcagaacgatgacccctctgcattctacaaggtt
cccttctctagagttgtatacattgatcaatctgacttccgtatgaaggattcaaaagat
tactatgggctcgcccctggtaaatcagtcttgctaagatatggtttcccaatcaagtgc
accaacgttgtctttgctgatgacaatgaaaccattcgtgagattcatgcagagtatgac
cctgagaaaaagacaaagccaaagggtgttctacactgggttgcagaatcttccccagga
aaggaacccataaaggttgaagtccggttatttgagaaactcttcaactccgagaacccg
gctgaactcaatgatgattggcttactgacattaacccaaactccaaagtggtggtttct
gatgcctatgctgtatcaatccttaaagatgctgcggtcggggacagattccagttcgag
aggctaggttattttgcggtggacaaagactcagagccagggaagcttgtgtttaacagg
actgtcacactcagagacagctatgggaaaggtgggaagtaa
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