Raphanus sativus (radish): 108812082
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Entry
108812082 CDS
T06014
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00520
Amino sugar and nucleotide sugar metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108812082
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108812082
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
108812082
Glycosyltransferases [BR:
rsz01003
]
Polysaccharide
Structural polysaccharide
108812082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
108812082
NCBI-ProteinID:
XP_018439738
UniProt:
A0A6J0JW28
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Position
6:complement(19569296..19572246)
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AA seq
629 aa
AA seq
DB search
MVKFQNVVLFFLLLTVAAPILLYTDSYTSVNTPFSKREFLEDVSALTFNSEENRLNLIHR
ESPVDVRRGVVGVVYSKLDSDSPSIKARDQVSARVLSATDDETQSQTDNTIKQVTDHAVS
EMDKPNDMHASDEKEKAHNTVLFNERMRVQLTQKEPKDSGAEKESGNVMIPDAQVRHLKD
QLIRAKVYLSLPAAKANAHFVRELRLRIREVQRVVVDASKDSDLPKNAMERMKAMEQTLA
KGKEIQDDCSTVVKKLRAMLHSAEEQLRVHKKQAMFLTQLTAKTIPKGLHCLPLRLTTDY
YALNSSEQQFPNQEKLEDNQLYHYALFSDNVLATSVVVNSTITNAKHPSKHVFHIVTDRL
NYAAMRMWFLDNPPGKATIQVQNVEEFTWLNSSYSPVLKQLSSRSMIDYYFRAHHANSDS
NLKFRNPKYLSILNHLRFYLPEIFPKLSKVLFLDDDIVVQKDLSGLWSVDLKGNVNGAVE
TCGESFHRFDRYLNFSNPLISKNFDPRACGWAYGMNVFDLDEWKKQNITEVYHRWQNLNQ
DRDLWKLGTLPPGLITFWKRTYPLDRKWHVLGLGYNPSVNQRDIERAAVVHYNGNLKPWL
EIGIPKYRGLWSKHVDYQHVYLRDCNINP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtttcaaaatgttgttcttttcttcttgctcctcacggtagctgctcccatc
cttctctacaccgattcctacacctccgtcaacaccccattttctaaacgcgagttcctc
gaggacgtatccgccctgactttcaattccgaagagaatcgtttgaatctgattcatcgg
gaatctccggtagatgttagaagaggagtcgtgggtgtagtatactccaaactagactcg
gattctccgtctataaaagctagagaccaagtgtctgctcgagttctttcggccaccgac
gatgaaactcagtctcaaactgacaataccatcaaacaagtcactgatcatgcagtctca
gagatggacaagccaaatgacatgcacgcttctgatgagaaggagaaggctcacaatacg
gtacttttcaatgaaaggatgcgtgttcagttgacccagaaagagcctaaagactctgga
gctgagaaagagagtggaaatgtgatgatccctgatgctcaggtgaggcatcttaaagat
cagctgattcgggcaaaggtctatctttcacttccagctgccaaggctaatgcacatttt
gtgagagagcttcgtctccgtattagagaagttcaacgggttgtcgtagatgcctccaag
gattccgatctgccaaagaatgctatggaaagaatgaaagcgatggagcaaacattggcc
aaaggcaaggagattcaagatgactgttccacagtggttaagaagctacgtgcaatgctc
cactcagcagaggagcagctacgtgtccataagaagcaagccatgttcttgacgcaattg
actgctaagacgattccaaagggccttcactgcctccctctacgcctcactaccgattac
tatgctttgaattcgtctgaacagcaattccccaatcaggagaaactagaagataatcag
ctgtatcactatgccctcttctctgataacgttttggctacatctgttgtggttaactct
accataaccaatgccaagcatccctcaaagcatgtcttccacatcgttactgacagactc
aactatgcggcaatgaggatgtggttcctagacaacccaccaggcaaagccaccatccag
gttcagaacgttgaagaatttacatggctgaattcaagctacagccctgttctcaaacag
cttagttctcgatcgatgatagattactacttcagggcacaccatgccaattcagattcc
aacttgaagttccggaatccaaaatacttgtccatccttaatcatcttcgtttttacttg
cctgagatcttccccaagctcagcaaggtgctcttcttggatgatgatatagttgtgcag
aaggacctttctggtctttggtcagttgatctgaagggtaatgtcaacggtgctgttgag
acttgtggggaaagctttcatcgcttcgaccgttacctcaacttctcaaatccactcatc
tccaagaattttgaccctcgagcttgtggatgggcgtatggtatgaatgtttttgacctg
gacgagtggaagaagcaaaacatcacagaggtttaccatagatggcagaatctgaatcaa
gaccgagatttgtggaaactagggacgctgccgcctggtctcatcacattttggaaacga
acatacccgctagaccggaagtggcacgtgctgggtcttggatacaaccctagtgtgaac
cagagggatattgagagggcagccgtcgtgcactataatggcaacctcaaaccatggcta
gagattgggatcccaaaatatcgaggcctctggtcaaagcacgtcgactaccagcacgtt
tacctcagagattgcaacatcaatccttag
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