Raphanus sativus (radish): 108812096
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Entry
108812096 CDS
T06014
Name
(RefSeq) heat shock 70 kDa protein 4
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
rsz04141
Protein processing in endoplasmic reticulum
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108812096
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108812096
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108812096
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108812096
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108812096
03009 Ribosome biogenesis [BR:
rsz03009
]
108812096
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108812096
04131 Membrane trafficking [BR:
rsz04131
]
108812096
03051 Proteasome [BR:
rsz03051
]
108812096
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108812096
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108812096
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108812096
Spliceosome [BR:
rsz03041
]
Complex B
Other components
Prp19 complex
108812096
Complex C
Prp19-CDC5 complex
108812096
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108812096
Chaperones and folding catalysts [BR:
rsz03110
]
Heat shock proteins
HSP70 / DNAK
108812096
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108812096
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108812096
Proteasome [BR:
rsz03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108812096
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108812096
Exosome [BR:
rsz04147
]
Exosomal proteins
Proteins found in most exosomes
108812096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DACNG
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
108812096
NCBI-ProteinID:
XP_018439758
UniProt:
A0A6J0JW50
A0A9W3BYB5
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRFSDPSVQADMRHWPFKVVSGPAEKPMIVVNHKGEEKQFSA
EEISSMVLTKMREIAEAFLGTPIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKHKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKGNVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKK
KVDAKNALENYAYNMRNTIKDEKIASKLDAADKKKIEDAIDQAIEWLEGNQLAEADEFED
KMKELESLCNPIIARMYQGGAGADMGGAGGMDDDAPAGGSGGAGPKIEEVD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaaaggcgaaggtccagcgatcggaatcgatctcggcaccacctactcctgc
gtcggcgtgtggcagcacgaccgcgtcgagatcatcgccaacgatcaaggcaaccgcacc
actccttcctacgtcgccttcaccgacagcgagcgtctcatcggtgacgcggccaagaat
caagtcgctatgaaccctaccaacaccgtcttcgatgcgaagcgtctcatcggaagaaga
ttcagcgacccctccgtacaagcggacatgaggcactggcctttcaaagtcgtctccggc
ccagccgaaaagcccatgatcgtcgtcaaccacaagggagaggagaaacagttctcagcc
gaagagatctcctcgatggtcctcactaagatgcgcgagatcgccgaggccttcctcgga
acaccgatcaaaaacgccgtcgtaacggtcccggcctacttcaacgactcccagcgtcaa
gcgaccaaagacgccggagtcatctcgggactcaacgtgatgcgtatcatcaacgaacct
accgctgcagccatcgcgtacggtctcgacaagaaggcctctagcgtcggcgagaagaac
gtgctgatattcgatctgggaggcgggacgttcgatgtgtccttgctcacgatcgaggaa
gggatctttgaagtgaaggctacggctggtgatactcatctcggcggtgaggattttgat
aacaggatggtgaatcacttcgttcaggagttcaagaggaagcataagaaggatatcaca
gggaatccgagggcgttgaggaggttgaggacggcgtgcgagcgggcgaagaggactctc
tcttcgaccgcgcagacgacgattgagatcgattctttatacgaggggattgatttctac
acgacgatcacgcgcgcgaggttcgaggagctgaacatggatctgttcaggaagtgtatg
gagcccgtggagaagtgtttgagagacgcgaagatggataaggggaatgttcatgacgtt
gtgcttgttggtgggtccactaggatccctaaggtccagcagctgttgcaggattttttt
aatgggaaggagctttgtaagagtattaacccggacgaggctgttgcttatggagcggcg
gttcaggcggcgattctgagtggggaagggaatgagaaggttcaggatttgttgcttctt
gatgttacgcctttgtccttggggttggagactgctggtggtgtgatgactgttttgatt
ccgaggaacacaacgattccgacgaagaaagagcagatcttctcgacttattcggataac
cagcccggtgttttgatccaagtttacgaaggagagagagcaaggacgaaagataacaac
cttttggggaagtttgagcttagcggcatccctcctgcacctcgaggtgttccgcagatc
actgtgtgttttgacatcgacgccaacggtatcttgaacgtgtcggctgaggacaagacg
actggtcagaagaacaagattaccattactaatgacaagggaaggctgtcgaaggaagag
atcgagaagatggtacaagaagcagagaagtacaaagcagaggatgaagaacacaagaag
aaggtggatgcgaagaatgctttggagaactatgcgtacaacatgaggaacacgatcaag
gatgagaagatcgcgtcaaagcttgatgcagctgacaagaagaagatcgaggatgcaatc
gaccaggctattgagtggttggagggtaatcagctggcggaggcggatgagttcgaggac
aaaatgaaggagctcgagtctctttgcaacccaatcattgcgagaatgtaccaaggcggc
gctggtgctgacatgggtggcgctggtggcatggacgatgatgcacctgccggtggtagt
ggcggtgctggacctaagattgaagaagtcgattaa
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