Raphanus sativus (radish): 108812122
Help
Entry
108812122 CDS
T06014
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108812122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108812122
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108812122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
108812122
NCBI-ProteinID:
XP_018439793
UniProt:
A0A6J0JW86
LinkDB
All DBs
Position
6:complement(37726073..37732297)
Genome browser
AA seq
1456 aa
AA seq
DB search
MSSQEEEEIVMRDVTNAGLCIGDRIGREAASQLDLEEALEASRYASHPYSTHPREWPPLI
EVGDTWELPSVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDSRDGQCPEYT
GEDQAICAVGLTKCRPGVFVEAIQYLLVLATPAELVLVGVCCTQGPDGRDPYAEISVQPL
PDYTISSDGVAMTCVTCTSKGRIFMAGRDGHIYELLYTTGSGWNKRCRKVCLTAGVGSMI
SRWVVPNVFKFGAVDPVVEMVVDNERQILYARTEEMKLQAYVFGPNGEGPLKMVAEERNM
LNQKDVSQGNRQSTAAGRSNKPTIVSISPLSMLESKWLHLVASLSDGRRMYLSTSSSGSS
FSGFSNHRQSPNCLKVISTRPSPPLGAGVGLGSGAASLAGRTQTEDLSMKVETAYYSVGT
LVLSDSSPPAMSSLMVVSRDSSVRSQVGGTSGSSSRSSRALREVVSSLPIEGRMLFVADV
PPSPDTVATVQSLYSELEYCGVEVSGESYEKACGKLWARGDLSTQHILPRRKIVVFTTMG
MMELIFNRPVDILRRLLESNSPRSLLEDFFTRFGAGEAAAMCLMLAARIINFEDLISNIV
ADKAAEAFEDPRLVGMPQFDASSGLSNTRTATGGFSMGQVVQEAEPIFSGAHDGLCLCTS
RLLFPIWELSVMTKKVSSDAMSADGLVICRLSTSAMHVLESKIRSLERFLRSRRNQRRGL
YGYVAGLGGVTGSILYGTGSELGATERNMVRNLFGAYSNGGESANKRQRLPYSPAELAAT
EVRAMECIRQLLLRSAEALFLLQLLSQHHVARLVQGLDANLKQALVQLTFHQLVCSEEGD
QIATRLISAVMEYYTGLDGRGTVDDISGRLREGCPSYFKESDYKFFLAVERLERAALALD
TEEKENVAREAFSFLSKVPGSADLRTVCKRFEELRFYEAVVCLPLQKAQALDPDGDAFND
QIDTSIREHALAQRKQCYEIIANALRSLVGSMLEEALRRQYISQIVHLGVQSTDRAFREY
LYTAMIELGLENELLEYGGPDLVPFLKNAGSHSSSEVGAVSSESSPLVHSGTQISSSQAK
YFDLLAKYYVSKRQHVLAAHVFLRLAERHAIISGDSPTLEQRRQYLSHAVLQAKNASNSD
GLVGSAHGASDSGLLDLLEGKLAVLQFQIKIRDKLESIASSFESSVAMQDSYQNEPVLDG
DSIDDSSLANEKALELSLELKNITQLYNEYAVPFELWEICLEMLYFANYSGDADSSIIRE
TWSRLMEQALSQGGIAEACSVLKRVGSHIYPGDGVVLPLDVLCLHLEKAALERAERNEIV
GDEDIARALLAACKGAAEPVLNAYDRLLSNAAIVPSPNLRIRLLRSVLVVLLEWAMSVLS
DRMGSSPTRSSLMILGGSFAHENKAVRNQGVRDKIANAANRYMTEVRRLTLPPTKTESVY
AGFKELDESLITPFSF
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcaagaggaggaggagattgttatgagggacgtgacgaacgcgggactctgc
atcggtgaccgcattggccgagaagccgcatctcagctcgatctagaagaagctctcgaa
gcttccagatacgctagtcatccttactctactcatcccagagagtggccaccgttgatc
gaggtgggtgatacttgggagttgccttctgtgcttattgagaggtataatacagcaggc
ggtgaaggcacggctttatgtggcatctttccagagattcgacgggcttgggcctccgtt
gataactctctctttctctggcgtttcgattcaagggatgggcaatgtcctgagtatacc
ggggaggaccaggctatttgcgcggttggtttaaccaaatgtagacctggtgtttttgtt
gaagctattcagtatcttttggtgttggctactcctgctgagttggtgcttgttggagtt
tgctgcactcaaggacctgatggtagagatccatacgctgaaatttcagtacagcctctt
cctgactatacaatatcatccgatggagtagcaatgacatgcgttacatgtactagtaaa
gggcgcattttcatggctggacgtgatgggcacatatatgagcttctatatactactggc
tcgggctggaataaacgttgtcgtaaagtctgccttactgctggtgttggtagtatgatc
tcgaggtgggttgtgccaaatgtatttaagtttggagctgtagatcctgttgtagagatg
gttgttgataatgaaaggcaaatcttatatgcccgcactgaagagatgaaacttcaagcg
tatgtttttgggccgaacggggaaggccctctcaaaatggttgcagaagaaaggaatatg
ttaaaccagaaggatgtgagccaaggaaatcgacagtcaacagcggcaggtcgatctaac
aagccaaccatagtcagcatttcaccattgtccatgctagagtccaagtggttgcacctt
gttgcttccttatcagatggtaggaggatgtatctctccacctcgtcaagtggaagtagt
ttcagcgggttcagcaaccaccgccagtctccaaactgtttaaaagtcatttccactagg
ccatctcctccattgggggctggtgttgggcttggttctggagctgcatctcttgctggt
agaactcagactgaggatctctccatgaaggttgaaacagcgtattattctgttggaacc
cttgtcctttcagattcatctccacctgctatgtcttctcttatggtcgttagcagagat
tcaagtgttcgatctcaggtcggcggcacttcagggtcaagttcaaggagttctcgggca
ttacgcgaagttgtgtcctctctgcccattgaaggccgtatgctttttgtagcagatgtg
cccccctctcccgatactgttgcgacggttcaatctttatattcagaacttgaatactgt
ggagttgaagtctcgggagagtcttatgaaaaggcgtgtggaaaactctgggccagaggt
gatctttcaacccagcatattttgccaagaagaaagatagtcgtttttaccaccatgggt
atgatggaactgatctttaatagacctgttgatatattgagaagacttctagaatccaac
tctccaaggtcccttttggaagattttttcactcgctttggagcaggtgaagccgctgcg
atgtgcttgatgttggctgcccggataataaattttgaagatttaattagtaacattgtt
gccgataaagcagctgaggcttttgaggatcctagactcgtaggaatgccacaatttgat
gccagtagtgggttgtcaaacactagaacagcaactggaggtttcagcatgggccaagtt
gttcaagaagccgagccaatattctcaggcgctcacgatgggctctgcctttgtacttca
agactactttttcccatatgggagctttctgtaatgactaaaaaagtcagttctgatgcc
atgtctgcggatggactggtgatttgtcgtctttctactagtgctatgcatgtgctggaa
agcaagattcgatcgttggagagattcttaagatctagaaggaaccagagaagggggctt
tatggatatgttgcggggttaggaggtgtaactggctctattttgtatggtactggctca
gagttgggagctactgaaaggaatatggttaggaacttgtttggagcatattctaatgga
ggagagtcagcaaataaaagacaacgcttgccatatagtcctgctgaattggctgccacg
gaggtgagggcgatggagtgtattaggcagttgcttctcagatctgcggaagcccttttc
ctactccaacttctttctcaacatcatgttgccagattagtccaggggcttgacgcaaac
ttaaagcaagctttggtccagttgacgttccatcagctagtgtgttctgaagagggtgac
caaattgcaacaagactcatatctgccgtgatggagtattatactggcttagatggcagg
ggaacagttgatgatataagtgggagactacgtgaaggttgcccaagttacttcaaggag
tctgattacaaattctttttagctgttgaacgccttgaaagagctgcgttagctttagat
actgaggagaaagagaatgttgctagagaggcgttcagtttcttgagtaaagtccctgga
tctgcagatctcagaactgtctgcaaacgttttgaagaattgaggttctatgaagctgtt
gtctgcttgcctttgcagaaggcccaagcccttgatcctgacggcgacgctttcaatgac
cagattgatacttctattagggagcatgctcttgcccagcggaaacaatgctacgaaatt
atcgccaatgccttgcgatctctagttggttccatgctagaggaggctttacgtagacaa
tatatatctcaaatcgttcatcttggtgtgcaatcaactgacagagcattcagggagtac
ctatacacggccatgatagaactgggtcttgaaaacgagctgctagagtatggaggtcca
gatttggtaccttttctcaagaatgctggtagtcattcttcatcagaggtcggtgccgtt
tcgtctgaatcatctccgctggttcactcagggacacagatttcatcaagtcaagcaaaa
tactttgatttgcttgcgaaatactatgtgtcgaaaagacagcatgtgcttgctgctcat
gtgttcttaaggcttgcagaacgacacgcaattatttcaggggacagtcctactcttgaa
caaaggcgacaatacctaagccacgcagttttacaggccaagaatgcaagtaatagtgat
ggtttagtaggttctgctcacggtgcttctgacagtgggttgcttgatctgcttgaagga
aaactcgcagttctccagttccaaataaagatcagagacaaacttgaatctattgcttcc
agtttcgagtcctctgttgccatgcaggactcttaccagaatgaaccagtacttgatggt
gattctattgacgattccagcttagcaaatgaaaaggccttggagctctctttggaactt
aaaaacataacgcagttgtataatgaatatgctgtcccatttgagctctgggagatctgt
ctggaaatgctctactttgccaactattctggtgatgctgattcaagcatcataagggaa
acatggtctagactcatggagcaagctctttcacaaggcggaatagctgaagcatgttca
gttctcaagagagtcggttctcatatatatcctggcgatggagttgttttaccgctcgat
gttttgtgccttcacctcgagaaagctgcacttgagagagcagagaggaatgaaattgtt
ggggatgaagacatagctcgagctctactagccgcctgcaaaggcgcagctgaacctgtg
ctcaacgcttatgaccgtttattatccaatgcagccattgtaccatcgccgaatctaaga
atccggctccttcgttcggttctggtggtgctacttgaatgggcaatgtctgtgttgtca
gacagaatgggctcgagtccgaccaggtcttctttgatgatattaggtggctcgtttgcg
cacgagaacaaagccgttcgtaaccaaggggttcgtgataagatagcaaacgcagcaaac
aggtacatgaccgaggttaggagactgacgctaccaccgacgaagacggagagtgtatac
gcaggtttcaaagaacttgacgagtctctcattactccattctccttctga
DBGET
integrated database retrieval system
