Raphanus sativus (radish): 108812146
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Entry
108812146 CDS
T06014
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108812146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108812146
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108812146
Membrane trafficking [BR:
rsz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108812146
Atg1 complex
108812146
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108812146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
108812146
NCBI-ProteinID:
XP_018439821
UniProt:
A0A6J0JXK9
LinkDB
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Position
6:complement(6390633..6393220)
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AA seq
578 aa
AA seq
DB search
MNRGSSNSEGAKAEQIIFEFFAKSLHIILESRTPFMSSRNFSGDQMISSPCSSSSSSSSV
RPRDKWFNLALRECPAALESFDIGRRSSLEPLVVDVVLVARQFDHQDELGCEQVIERWLV
QYDNRQVREASSSRRSSSSSSSNSKLQVMYKKATLLLRSLFVMVRLLPAYKIFRELNSSG
QICKFKLVPKVPTIVEPFTRREEAEMQRFAFTPVDTICGRLCMSVLYRSLSDVSCQQSAP
VSPTFITDYVGSPLADPLKRFPSLPLSYGSPPLLSFQRRHSWSFDRCKASPPPPSVSCSP
SPTRSDSQALIRRLPPHPSREFSPPCSPSGPVSRGITRTESAPVRIPAPSFESKQNLVAP
SPRLKLLRQASLKPVRNNGGAVESGAGLDKLFLYGREDFRRNSGVRLSTNSSPRISFSRS
SSRSYQDDFDDTDFPCPFDVEYDEITDPSSRAGSFDQRGDIHDPPLESSGSYPKKSQDAA
VGALVNMLKKAPPLRQDVSGSSVPEIYWNNNNNKPTTGAHHNKIATSSSMTASGIALAAK
TTADALEELRSYKEMKNVLLSQSTMASSSTSPFAVSES
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggggtagtagcaattcagaaggtgccaaagcagagcagatcatattcgagttc
ttcgccaaaagcctccacatcatcctcgagtcaagaacccctttcatgtcatcaagaaac
ttcagcggcgaccagatgatctcttccccttgctcatcctcttcatcctcctccagcgtc
aggccacgcgacaaatggttcaacctagctctcagggaatgccctgcggctttagagagt
ttcgatatcggtcgcaggagcagcctcgagcctctggtcgtcgacgtggttctcgtggcg
agacagtttgatcatcaagacgagttagggtgtgagcaggtgatagagaggtggttggtg
cagtatgataacagacaggttagggaagctagcagcagcaggaggtcaagtagtagtagt
agtagtaacagtaagctgcaagtgatgtataagaaagctactttgctgctgagatcgctc
tttgtgatggttaggctcttacctgcttacaagatcttcagggagctcaactcgtctgga
cagatctgtaagtttaagctcgtgcctaaggttccaaccatagtagagccgttcactcgt
agagaagaggcagagatgcagaggttcgcttttactccggttgataccatctgcgggagg
ctttgtatgtctgtgttgtatcggtctttatctgacgtcagctgccaacagtcagctcct
gtgtctccgacgtttataacggattacgttggtagtcctttggctgatccgttgaagagg
ttcccttctttgcctctctcgtacggttcgcctccgttgctgtctttccagaggcggcac
agctggagtttcgatcgttgcaaggcctctcctcctccgccttcggtttcttgctcgcct
tcgcctacacggtcggattcacaagcgttgattcgtcgccttcctcctcatccttctcga
gagttctcccctccttgctctccttcaggacctgtctctagaggcatcacgcgtactgag
agtgctcccgttagaatccctgctcctagttttgagtccaaacagaacttggtggcgcct
tctcctcgtttgaaattgttgagacaagcttctttgaagcctgtgagaaacaatggtggt
gctgttgaatctggagcaggattggacaagctgtttctttatgggagagaagactttagg
aggaactctggtgtgaggctatctaccaacagctcgccgaggatatcgttttctcgaagt
tcgagtagatcataccaagatgattttgatgatactgacttcccttgcccctttgatgtt
gagtatgatgagattactgatcctagtagcagagcaggatcgttcgaccagagaggggac
atacatgacccaccactagagtcaagcggctcctacccaaagaagtcacaagatgctgca
gttggtgctcttgtgaatatgctgaagaaagctccgcctctcagacaagacgtctccgga
tcttccgtacctgaaatttattggaacaacaacaacaacaaacctactacaggggctcat
cacaacaagatagcaacgtcatcatcaatgacagcatcagggattgctctagctgcaaag
acaacagctgatgcgttggaagagttgaggtcgtacaaggaaatgaagaatgtgctgctt
agccaatccacaatggcttcttcttctacttcaccctttgctgtttcagaatcttga
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