Raphanus sativus (radish): 108812190
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Entry
108812190 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108812190
KO
K24752
WD repeat-containing protein 70
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108812190
03036 Chromosome and associated proteins [BR:
rsz03036
]
108812190
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108812190
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108812190
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
108812190
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
108812190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
EIF3I
WD40_Gbeta
Beta-prop_IFT140_1st
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
CFAP251_N
PAC11
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_EIPR1
ASA1
Beta-prop_HPS5
Cytochrom_D1
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
108812190
NCBI-ProteinID:
XP_018439880
UniProt:
A0A6J0JVY0
LinkDB
All DBs
Position
6:23139093..23141908
Genome browser
AA seq
638 aa
AA seq
DB search
MEDDELEAMRAHFPLSFGKSSNVPPKPTEAIHSATRRTDAGVSSSDSGFPSLSSSSKSWL
QSVRAPKRNPKSNPAPPPDDDVSLGPPPPPPPPSQEKEEEDDDGVMVGPPPPPPPKGSDD
EDDMIGPPPPPPPHVDSDEDEDDVDDDEEENRYKIPLSNEIQLKGHTKIVSSLAVDNAGA
RVLSGSYDYTVRMYDFQGMNSRLLSFRQIEPSEGHQVRSLSWSPTSGQFLCVTGSAQAKI
YDRDGLSLGEFMKGDMYIRDLKNTKGHICGLTYGEWHPKNKETVLTSSEDGSLRIWDVNN
FLGQTQVIKPKLARPGRIPVTTCAWDREGKRIAGGIGDGSIQIWSLKPGWGSRPDIYVGK
AHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKAFDGLPNNYPQTNVAFSPDE
QLILTGTSVEKDSTTGGLLCFYDRTKLEIVQKVGISPTCSVVQCAWHPRLNQIFATSGDK
SQGGTHILYDPTQSERGACVCVARAPRKKSVDDYQPEPIIHNPHALPLFRDAPSRKRQRE
KTLKDPLRAHKPELPMSGPGHGGRVGTTGSSLLTQYLLKQGGMIKETWMEEDPREAILKY
ADVAVKDPKFIAPAYSQTQPETIFAKSDDEEEEGDAKK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatgaattggaagcaatgcgagctcacttccctctctctttcggcaagtct
tccaatgttccgccgaaacctaccgaagccatccacagcgctactcgccgcactgacgcc
ggagtttcgtcgtccgattccggattcccgtctctgtcttcctcttctaaatcctggctc
caatctgttcgcgctcccaaacgtaaccctaaatctaatccagctcctcctcccgacgat
gatgtatccttaggaccaccaccaccgccgccgcctccctctcaagagaaagaggaggag
gatgatgacggagttatggtgggaccaccgcctccaccgccaccaaagggatctgatgat
gaggacgatatgatcggtcctcctccaccgcccccgcctcatgtagattccgatgaagat
gaggacgatgttgatgacgacgaggaggagaatcggtacaagataccattgagcaatgag
attcagctcaagggacatactaagatagtatcaagtctggcggttgataacgcgggagct
agggttctctctggtagctatgactacactgttcgcatgtacgatttccaaggcatgaat
tcgagacttctgtcctttaggcagattgaaccttctgaaggtcaccaagttcgcagcttg
agctggagtcccacttctggtcagtttctatgcgtcactggctctgcccaagctaagatt
tatgatcgtgatggacttagccttggtgagttcatgaaaggggatatgtacatccgtgat
ctcaagaacactaagggccacatttgcgggttgacttacggagaatggcatcccaagaat
aaggaaaccgttctgacttcttctgaagacgggtctttacgtatttgggatgttaataac
ttcctaggccaaacgcaggttattaagcccaagcttgctagaccggggaggattccagtt
acgacttgtgcttgggatcgtgaaggaaagcgtatcgctggtggcataggagatggatct
attcagatttggagtctcaagcccggatggggaagccgaccagacatatatgttgggaaa
gcccacactgatgatatcacctctgttaagttctctagcgatgggagaattctcctgtca
agaagttttgatggttctctaaaggtgtgggacttgcggcaaatgaaagaagcccttaag
gcttttgacggtctccctaacaattatcctcaaaccaacgttgcctttagtccggatgaa
caacttatcctgactggaacatccgttgagaaggacagtacaacaggaggcttgctctgc
ttttacgaccggactaaactcgagattgttcaaaaagtcggaatatctccaacttgcagc
gtggtgcaatgcgcttggcacccgaggttgaatcagatatttgcaacatctggagacaaa
agccaaggaggaactcacattctgtacgacccaactcagagcgagagaggtgcatgtgtg
tgcgttgcacgtgcaccaaggaagaaatctgtagacgattaccaaccagaaccaataata
cacaatccccatgcactacccttgttcagagacgcaccaagccgtaaacgacaaagggag
aaaacattaaaggatcctcttagagcccataagcctgagcttcccatgagcggtcctggt
catggtggaagagttgggaccactggtagcagcttattaactcagtatcttctcaagcaa
ggtgggatgataaaagagacatggatggaggaagatccaagagaagcgatattgaaatac
gcagatgttgctgttaaagatccaaagtttattgctcctgcttattctcagacccagcct
gagaccatcttcgctaaatcggatgatgaagaagaagaaggtgatgccaaaaaataa
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integrated database retrieval system
