Raphanus sativus (radish): 108812225
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Entry
108812225 CDS
T06014
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108812225
03012 Translation factors [BR:
rsz03012
]
108812225
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108812225
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
eIF-3
108812225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
IKI3
Motif
Other DBs
NCBI-GeneID:
108812225
NCBI-ProteinID:
XP_018439922
UniProt:
A0A6J0JW66
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Position
6:42533549..42537006
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AA seq
714 aa
AA seq
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MAELDIDTRAAQLGIDWSQVNLDSVKLPPGENFGIESDDEGVYHDDQLEFDTGFGNIIVV
DNLPVVPKTKFEKLENVLKKIYSQLGVIKERGLWMPVDPNTGTTLGYCFIEFNTPQEAQN
AKEKTHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEAPQTKPYVPGENLQKWLTDEKARDQ
LVTRSGPDTEVLWNDARQKNTELVHKRSYWTESYVQWSPLGTYLVTLHKQGAAVWGGADT
FTRLMRYQHNMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKGS
ADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFGLIDKKSIKVDNV
VDICWSPTDSILSLFVPEQGGGNQPAKVALVQIPSKVELRQKNLFSVSDCKMYWQSSGEY
LAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHG
DQPRPDVSFYTMKTTQHGGRVTKLGTLKAKQANALFWSPTGKYIILAGLKNFNGQLEFFN
VDELETMATTEHFMATDVEWDPTGRYVATAVTSVHEMENGFTIWSFNGKLLYRNLKDHFF
QLAWRPRPPSFLSPEKEEEIAKNLKKYSKKYELEDQDVSLLLSEQDREKRKALKEEWEKW
VKQWKSLQEEEKLARQNLRDGEISDEEEEEDEAKEVKEVEFEDVIDVTEEVVQE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactggatattgacacccgcgcggctcagttagggatcgattggtctcaggtt
aatctcgattccgttaaactccctcctggagagaacttcggtatcgagagtgatgatgaa
ggtgtttaccacgacgaccagctagaattcgacacagggttcggcaatataatcgtggtc
gataacctccccgttgttcccaagaccaagtttgagaaactcgagaatgtccttaagaag
atttacagccagcttggcgttatcaaggagagaggactttggatgcctgttgatcccaac
accgggacgacgttgggctactgtttcatcgagtttaatacccctcaggaagctcaaaac
gctaaggagaagactcatgggtacaagttggacaagtctcatatctttgctgtgaacatg
ttcgatgattttgacaggctcatgaatgtcaaggaggagtgggaggctcctcagaccaag
ccctatgtccctggggaaaacttgcaaaagtggcttactgatgagaaagcaagggatcag
cttgtcactcgctctggtcctgataccgaagtcttgtggaatgatgctaggcagaagaat
actgaactcgttcataagcgttcgtattggacagagagctatgtgcagtggtctcctctt
ggtacgtacctcgtgacacttcacaagcagggggcagctgtttggggtggtgctgatacc
ttcactcgtctcatgcgttatcagcataacatggtaaaattagttgatttctctcctggt
gagaagtacctggtaacttaccatagccaggaaccaagtaacccacgggatgcaagtaaa
gtagagataaaggtctttgatgtgagaaccgggaggatgatgagagatttcaagggtagt
gctgatgagttttcaattggaggacctggcggtgttgctggtgcttcttggcctgttttc
agatgggctggtggaaaagacgataaatactttgccaagctcagcaaaaacacgatatct
gtctacgagaccgagactttcggcctaattgacaagaaatccatcaaggttgataatgtc
gtggacatctgttggtctcctactgactccatcctttcactctttgttcctgaacaaggt
ggtgggaaccagcctgccaaggttgctcttgtccaaatccctagcaaggtggagctaagg
cagaagaatctcttcagcgtgagcgactgcaaaatgtactggcagagtagtggagagtat
ctcgctgtcaaggttgatcgatacacaaagacaaagaagagcacgtactctggcttcgag
cttttccgcatcaaagagagggatattcccatcgaggttctcgagctggacaacaagaac
gacaagatcatcgctttcgcgtgggagcccaagggtcacaggtttgctgtgattcatggt
gaccaaccaagaccagatgtgagtttctacacgatgaagaccacacaacacggtggaagg
gttacaaagctcggtactttgaaggccaaacaagccaatgccctcttctggtcgcccaca
ggaaagtacattattcttgctgggttgaagaatttcaacggccagcttgaatttttcaac
gtggatgagctcgagacaatggccacaactgaacacttcatggccactgatgtcgaatgg
gacccaactggaaggtacgttgcaacagcagtgacgtcagtccatgagatggagaatgga
ttcaccatctggtcgttcaatggaaaattgctttacaggaatctgaaggatcatttcttc
cagttggcatggcgcccaagacctccatcattcttgtctccggagaaggaagaagagata
gcaaagaacctgaagaagtacagcaagaagtacgagttggaggatcaggacgtctcgttg
ctgttgagtgaacaagacagagagaagaggaaggcgttgaaggaagagtgggagaaatgg
gtgaagcagtggaagtcgctgcaggaagaggagaaacttgcgaggcaaaacctcagggat
ggagaaatcagtgatgaggaagaagaagaggacgaagccaaagaagttaaagaagttgag
tttgaggatgttattgacgtcactgaagaagtcgtccaagaatga
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