Raphanus sativus (radish): 108812309
Help
Entry
108812309 CDS
T06014
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
rsz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108812309
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108812309
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108812309
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108812309
03036 Chromosome and associated proteins [BR:
rsz03036
]
108812309
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108812309
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108812309
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108812309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
SPARC_Ca_bdg
P2R3B_EF-hand
Phage_Inh_C
SRI
Motif
Other DBs
NCBI-GeneID:
108812309
NCBI-ProteinID:
XP_056844082
UniProt:
A0A9W3BXU5
LinkDB
All DBs
Position
6:complement(15591253..15595612)
Genome browser
AA seq
458 aa
AA seq
DB search
MAGGAPLNVLTASASASSSATTPSEGILPRTCGSPRKKKQRPALSNFSSSLKVTKELVKE
PLPQFYFQNGRPPSIEMKEQCMFSINHFFCGHLDGLQIQEFKLVTREICKLPSFFSALLF
RKIDFNNTGFVPREAFVNYWVNVNMLTMDTATQVFKILKQYNQNFIVKDDFKPLLKELLS
SHPGLAFLQTKPEFQERYAETVIYRIFYYINRSGSGRLTFRELRRGNLIDAMIHADQEED
INKVLRYFSYEHFYVIHCKFCELDTDHDLLIDKEDLMRYGNHALTLRIVDRIFSQVARKF
TSKGEGKIGYEDFVYFILAEEDKSSVSSLEYWFKCVDLDGNGILTRDEMLFFYEEQMRWK
ECLEEEAVLFEDVLCQIIDMIRPEKESYITLRDLKGSKLSGEVFNMLFNLNKFMAFETHD
LLLIPQECENPVLTEWERFAHRDYIRLSMDDRCIEWKC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctggaggagctcctttgaatgttctaactgcaagtgcatctgcttcaagttctgcc
accacaccatctgaggggattttaccgaggacttgtggttcaccgcgtaagaagaaacag
agacctgccctttctaacttcagttcctcactaaaagtaaccaaggagcttgttaaagag
ccattgcctcagttttattttcaaaatggtcgcccaccatcaatcgagatgaaagagcaa
tgtatgtttagtatcaaccattttttctgtggtcacttggatggacttcagatacaagaa
ttcaaattagtaaccagagaaatctgcaagctcccatctttcttctccgctttacttttc
aggaagatcgatttcaataatacaggttttgttcccagagaagcattcgttaattattgg
gttaacgtcaacatgttgacaatggatacagccacacaagtctttaagatactaaagcag
tacaatcagaattttattgttaaggatgatttcaaaccactacttaaagaactgttgtca
tcacatcctggcctagcgttcctgcaaactaaacctgagttccaagaaagatatgctgaa
actgtcatctacagaatattttactacataaatagatctggaagtggtcgacttacattt
agggagcttagacgtggaaacttaattgatgcaatgattcatgctgaccaagaagaagac
atcaacaaagtgttgaggtacttctcatatgagcatttctatgtcatacactgcaagttc
tgtgagctggatacggatcatgatctcctgattgacaaagaagatcttatgagatatgga
aaccatgctctaactttacgtattgtcgacagaatattctcccaggttgctaggaagttc
actagcaaaggtgaagggaagatagggtatgaggattttgtctatttcatacttgcggaa
gaagataaatcgtcagtgtctagcctagaatactggtttaagtgcgtagacttggatggg
aatgggattcttacaagagatgaaatgctattcttttatgaggagcagatgcgttggaag
gagtgcttggaggaagaggctgttctttttgaggatgtcttgtgccagattattgatatg
attagaccagagaaagaaagctatattaccctgcgtgacctgaagggctccaaactctct
ggagaagtcttcaacatgctgtttaacctaaacaaatttatggcatttgaaacacatgat
ctattacttattcctcaggagtgtgagaaccctgtgctgacagagtgggaacgttttgca
catagagattacataaggctttcgatggatgatagatgcattgaatggaagtgttga
DBGET
integrated database retrieval system
