Raphanus sativus (radish): 108812401
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Entry
108812401 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108812401
KO
K03267
peptide chain release factor subunit 3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108812401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108812401
03012 Translation factors [BR:
rsz03012
]
108812401
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108812401
Translation factors [BR:
rsz03012
]
Eukaryotic type
Release factors
108812401
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
108812401
NCBI-ProteinID:
XP_018440155
UniProt:
A0A6J0JWN2
LinkDB
All DBs
Position
6:12481756..12486669
Genome browser
AA seq
494 aa
AA seq
DB search
MDLKDEFQESTPIPDVQQASEDHDQEVLHPVHDPAKATEKAAQGKAAKEDAEEVAEANKK
RHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKEKSRESWYMAYIMDTNEE
ERAKGKTVEVGRAHFETETTRFTILDAPGHKNYIPNMISGASQADIGVLVISARKGEFET
GYERGGQTREHVQLAKTLGVSKLVVVVNKMDDPTVNWSKERYDEIEQKMVPFLKSSSYNT
KKDVIFLPVSGLMGINIDKNMDRNVCPWFSGPSFFEVLNAIEVSPQNPNGPFRMPIIDKF
KDMGTVVMGKIESGSIREGDSLIVMPNKEHVKVIAIYCDEDKVKRAGPGENLRVRITGIE
DEDILAGFVLSSTVKHVSAVTEFVAQLQIIELLGNDIFTAGYKAILHIHAVVEECEIIEL
ISQIDMKTRKPMKKNKIVYVKNGAAVVCRIQVSNSICVEKFSDFPQLGRFTLRTEGKTIA
VGKVTALSSAFSSI
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaaagatgagtttcaagaatcaacgccaatccctgatgtgcaacaagcttcc
gaggatcatgatcaggaagtgctccatccagtgcatgacccagcgaaagccacagagaag
gcggcccaaggaaaggctgccaaagaggacgcggaagaagtggcagaggcaaacaaaaag
agacacttaaatgtggtgttcattggacatgttgatgctggaaagtctactatcggagga
caaattctctttcttagcggtcaggtagatgaccgacaaattcaaaagtatgaaaaggaa
gcaaaagaaaaaagtagagaaagctggtatatggcatatataatggatacaaatgaagaa
gagagggccaagggtaaaacagttgaagttggaagggctcattttgaaactgagaccacc
agatttacaattcttgatgccccgggccacaagaattatataccaaatatgattagtgga
gcatctcaagcagacattggtgtgctggtgatatctgctcgtaaaggtgaatttgaaaca
ggatatgagaggggtgggcagacacgtgagcatgttcaacttgcaaaaacattgggagtg
tcaaagctagtggttgttgtgaacaagatggatgatccaactgttaactggtcgaaagaa
agatacgatgaaatagaacaaaaaatggtaccgtttcttaaatcctctagctacaacaca
aagaaagatgttattttcctccctgtatctggtttaatggggattaatatagacaagaat
atggatcgaaacgtttgtccttggtttagcggccctagcttttttgaagtccttaatgct
attgaagtttcgccacaaaatcctaatggtccattcaggatgcccattattgataaattc
aaagatatgggaactgttgttatgggtaagatagaatctggcagcatccgggaaggtgat
tccttgattgttatgccaaataaggaacacgtgaaagttatagctatatattgtgacgaa
gataaagttaagcgtgctggaccgggtgagaatttgagagtccgtataactggcattgaa
gacgaggatatccttgcaggttttgttttatccagcacggtaaagcatgtatctgccgtt
actgagttcgttgcccaactacaaatcattgagctgcttggcaacgatatttttacagct
ggttacaaggctattcttcatattcatgcagttgttgaggaatgtgagataattgaattg
ataagccaaattgacatgaagacgaggaaacccatgaaaaagaataaaattgtgtatgtg
aagaatggtgctgctgttgtctgccgtatacaggttagcaattcaatttgtgttgaaaaa
ttctcagattttccgcagcttggaagattcactctacgaactgaaggaaaaacaattgct
gttggaaaagtgactgcgttatcaagtgctttctcaagcatttga
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