Raphanus sativus (radish): 108812415
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Entry
108812415 CDS
T06014
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108812415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108812415
Enzymes [BR:
rsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108812415
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
108812415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_exo2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
108812415
NCBI-ProteinID:
XP_018440170
UniProt:
A0A6J0JWP1
LinkDB
All DBs
Position
6:complement(44857940..44866887)
Genome browser
AA seq
1529 aa
AA seq
DB search
MSGDNSTEGGRKRSRGAEASTRKEALERLKAIREGGRRNLSAASGGGYDIRIEEPIFDTV
DDDEYESIVSRRREEARGFVVDDGEDGDLGYGDEGEEEDFTKPSGPDSTDESDDGGGGFS
GRLRKKKGEKKKAKEQQPQVKKVNPALKAAATITGEGRLSSMFTSSSFKKGKETDKVKCE
GILDEVLAEVTPDDLDRERHRRRKQPSTTVPITFSRNKNVVSVTSSVPMQVLEPTSDRVF
MEKELMKELKEEAVTESEVTPQGDSEKMELPGSGGVIEDGSNDVRQSEAKAESEVKEVYT
LNATVDTKEKDSALSATAGWKEAMGKGGTDGASLSSNSEGQSEFDLDADGSLRFYILDAY
EEAFGASMGTIYLFGKVKMGDTYKSCSVVVKNIQRCVYAIPNDSVFPSHELITLEQEVKD
SKLSPESFRGKLHEMASNLKKEVSQQLLQLNVSSYSMALVKRNYAFERPDVPVGEQYVLK
INYPFKDPPLPEDLKGESFSAVLGSHTSALELFILKRKIMGPSWLKISKFSTNSPSQRVS
WCKFEVTVESPKVITVLVSEEKIVHPPAVVTAINLKTIVNEKQNISEIVSASVLCFHNAK
IDVPMPGPERKRSGILSHFTVVRNPEGTGYPIGWKKEVADRNSKNGCSVLSFENSERALL
NRLFLELNKLDSDVLVGHNISGFDLDVLLQRAQACKVLSSMWSKIGRLKRSSMPKLKGYT
NSGSGATPGLMSCIAGRLLCDTDLCSRDLLNQVSYSLTDLSKTQLNRDRKEIPPNDIPKM
FQSSKTLVELIECGETDAWLAMELMFHLSVLPLTLQLTNISGNLWGKTLQGARAQRIEYY
LLHTFYSKKYILPDKLSQRMKEIKSSKRRMNHGPEDHNVDELDADLALENDPSKGNKTKK
GPAYAGGLVLEPKKGFYDKYVLLLDFNSLYPSIIQEYNICFTTIPRSEDGVPRLPSSQTP
GILPKLMEHLVSIRKSVKLKMAKETGLKYWELDIRQQALKLTANSMYGCLGFSNSRFYAK
PLAELITLQGREILQRTVDLVQNHLNLEVIYGDTDSIMIHSGLDDIEEVKAIKTKVIQEV
NKKYRCLKIDCDGIYKRMLLLRKKKYAAVKLQIKDGKIYEEIERKGVDMVRRDWSLLSKE
IGDLCLAKILHGGPCDDVVEAIHNELMKIKEEMRNGQVALEKYVITKALTKSPEAYPDSK
SQPHVQVALRMRQHGYKEGFNAKDTVPYIICYEQGNTSSASSAGIAERARHPDEVKSKDS
KWLVDIDYYLAQQIHPVVSRLCAEIQGTSPERLAECLGLDPSKYRSRSNDATGSDPSTSL
LFATSDEERYKSCEPLALACPSCSAAFNCPSIISSVCASISKKSETEESDSTFWLKLQCP
KCEPGGNTGRISPAMISNQVKRQIDGFVSMYYKGIMMCDDESCKHTTRTPNSRLLGDRER
GTVCPNYPNCNGTLLRKYTEADLYKQLSYFCHILDTQCTLEKQMDVGVRIQVEKAMTKIR
PAVQSAASMARSIRDRCAYGWLQLTDIAI
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgataattcgacggagggtggccgaaagcgaagcagaggcgcggaggcatcg
actcggaaggaagccctagagcggctgaaagcgatccgggaaggaggacgtcggaatcta
tcagcagcttcaggcggtggctacgacatcaggatagaagaaccgatcttcgacaccgta
gacgacgacgagtacgaatcgatcgtgtcccgacggcgcgaggaggctcgcggattcgta
gtcgacgacggggaggacggggatctgggatacggcgacgaaggcgaggaggaggatttc
acgaagcccagtgggcctgattcgacggatgaatcggacgacggtggtggtggatttagc
gggaggctgaggaagaagaaaggtgagaagaagaaggcgaaagaacagcagcctcaggtg
aagaaggtgaatccggcgcttaaggctgcggctactattacaggtgaagggaggctttct
tcgatgttcacgtcttcgagttttaagaaggggaaagagactgataaggtgaaatgcgag
ggtattcttgatgaggttttagctgaggtgactcctgatgatttggatagagaaaggcat
aggagaaggaaacaaccatctactacagttccgattactttctctaggaacaaaaatgtg
gtttctgttacctcgagcgtgcctatgcaggttttagaacccacaagtgatcgtgttttc
atggagaaggagttgatgaaagagctgaaagaagaagctgtgacagaatctgaagtcact
cctcagggtgattctgagaagatggagttacctgggagtggtggtgttatagaggatgga
tcaaatgatgtgagacaaagtgaagcgaaggctgagtcagaagttaaggaggtgtataca
ttgaatgcgacagttgatacgaaagagaaggattcggctctaagcgccactgctggttgg
aaagaagcgatgggtaaaggtggaactgatggggcttcacttagttctaactctgaaggg
cagtcggaatttgatttggatgctgatggttcacttcgtttttacattcttgacgcttac
gaggaggcctttggggcgagtatgggcacaatatatttgtttgggaaggttaagatggga
gacacgtacaagagttgctctgtggtagttaagaatatccagagatgtgtttatgctatc
cccaatgattccgtatttccttcccatgaattaatcacgctcgagcaagaggtgaaagac
tcgaaactttctcctgaatccttccgggggaagttacatgaaatggcatcaaatttgaag
aaagaagtttctcagcaattgttacaactcaatgtttcaagttatagcatggcacttgtc
aagagaaactatgcatttgagaggcctgatgtgcctgttggcgaacaatatgtcttgaag
ataaattatccatttaaggatcctccacttccagaagaccttaaaggggagtcttttagc
gctgtccttggctctcacaccagtgctttggagctttttatccttaaaaggaagatcatg
ggaccgtcttggctcaaaatttcaaaattttctaccaattcaccctctcaacgagtgagc
tggtgtaagtttgaggttactgttgagtctcccaaggttatcactgttttagtttcggag
gaaaaaattgttcatcctcctgctgtagttacagccataaatttaaagactatagtcaat
gaaaagcagaacatcagcgaaattgtttctgcgtctgttctctgctttcacaacgccaag
attgatgttccaatgccaggtccagaaagaaagaggtctggtattctgagtcatttcact
gttgttaggaatcctgaaggaaccggttacccaattggttggaaaaaagaagtggcggac
agaaattcaaagaacggctgcagtgttttaagttttgaaaatagtgaaagagcattgctg
aatcgactgtttctggagctgaacaaattggacagtgatgttcttgtgggtcataatata
tcaggttttgatctggatgtccttctccaaagagcccaggcttgcaaagttttgagtagc
atgtggtccaaaattggccgtctcaaacgctcttccatgcctaagcttaaagggtacact
aattctgggtccggtgctacaccagggctcatgtcttgcattgctggaagactcttgtgt
gatacagatctatgttctcgtgatttgttgaatcaggtcagttattcgttaacagatctt
tcaaagacacagctaaaccgggacaggaaagagataccgccgaatgacattcccaaaatg
tttcagtcatctaaaacacttgtggaacttattgagtgtggtgagacagatgcgtggtta
gccatggagctcatgtttcatctaagtgttcttccactcacactacagctaactaacata
agtggcaatctttggggaaaaactcttcagggagccagggcgcaaagaattgaatactac
ttactacatacattctactcaaagaagtacatcctcccagacaaactttcacaacgtatg
aaggaaataaagtcatcaaaaagaagaatgaatcacggtccggaggaccacaatgttgat
gaattggatgctgacctggctttggaaaatgatccgtctaagggcaacaaaacaaagaaa
ggtccagcctacgctggtggactggtcttggagccaaagaaaggcttctatgacaaatat
gttttgcttcttgatttcaatagtctttacccgtctattatacaggaatataatatctgt
ttcacgaccataccacgatcagaagacggagttcctcgtttaccgtcgagtcagacacct
ggaattcttccaaagctgatggaacatttggtcagtataaggaaaagcgtcaaactaaag
atggcaaaggaaacaggtctcaagtactgggagcttgacattaggcagcaggcattaaag
ctcacagccaatagtatgtatggttgtctggggttttccaattcaagattctacgctaag
cctttagcagagctcattacgctgcagggaagggagatcctgcaaagaaccgtggatctt
gtccagaatcatttaaacctagaggtgatttatggtgacacagattcaatcatgattcac
agtggactagatgatatcgaagaggtgaaagccataaaaacaaaagtcatccaagaggtc
aataagaagtatagatgtctgaaaattgactgtgatggcatatataagaggatgcttctt
cttagaaaaaagaaatatgctgccgtcaagttgcagatcaaggacgggaagatttacgag
gaaattgaaagaaaaggtgtggacatggttcgtcgagattggagcttactttccaaggaa
attggagatttatgcttggctaagatcttgcatggagggccatgtgatgatgtcgttgaa
gcaattcataacgagcttatgaagataaaagaggaaatgagaaatgggcaagttgcactt
gagaagtatgtcatcaccaaggcattgactaagtcaccagaagcttatccagattccaaa
agccaaccacacgttcaagtcgctctcagaatgaggcaacatggttataaagaaggtttc
aatgctaaggacactgtaccatatataatctgctatgaacagggtaatactagctctgct
agctcagcagggattgccgaacgtgctaggcatcctgatgaggtgaaatcaaaagacagc
aaatggttggttgacatagattactacttggcacaacagattcatcctgtggtgtctcgt
ttatgcgcagagattcagggcacaagtcctgagaggttagccgagtgtttaggacttgac
ccatcaaagtatcgaagcagatcaaacgatgctactggcagtgatccttctacatcactc
ttgtttgctacaagcgatgaagaaagatacaaaagctgcgagcctttagcattagcatgc
cccagctgctctgctgctttcaactgtccatctattattagctcagtttgtgcctcgatc
agtaagaaatctgaaacagaggaatctgattctacattctggcttaagctgcaatgcccg
aaatgtgagccaggtggtaacacgggaagaatatcccctgcaatgatatctaaccaggtg
aaaaggcagatcgatgggtttgtgtcaatgtactacaaaggcataatgatgtgtgacgat
gagtcttgcaagcacacgactcgcacccccaactcccgtctgcttggtgatcgtgaacga
ggaacagtttgtccaaactatcctaattgtaatggaaccctcttaagaaagtacactgaa
gcagacttgtacaagcagctgtcatacttctgccacatattagacacacaatgcactcta
gaaaagcagatggatgttggtgtcagaattcaagtagagaaagcaatgacgaagataaga
cctgcggtccagtcagcagcatccatggctcgaagtatccgagaccggtgtgcatacgga
tggctgcaactcacagacatagccatttga
DBGET
integrated database retrieval system
