Raphanus sativus (radish): 108812572
Help
Entry
108812572 CDS
T06014
Name
(RefSeq) 3-ketoacyl-CoA synthase 13
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00062
Fatty acid elongation
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz04626
Plant-pathogen interaction
Module
rsz_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
108812572
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108812572
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
108812572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
108812572
NCBI-ProteinID:
XP_018440364
UniProt:
A0A6J0K068
LinkDB
All DBs
Position
6:53119988..53121648
Genome browser
AA seq
462 aa
AA seq
DB search
MANFKFPLLILFVLYFSQLHLLQFHHDFFSSFPVKIGLLIISILLYAYSSTRSKPVYLVD
FSCHQPTDSCKISSETFFNMAKGAKLYTEETIQFMTRILNRSGLGDDTYAPRCMLTSPPT
PSMFEARHEAELVIFGALNSLFKKTGVEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKT
DVKTYNLSGMGCSAGAISVDLATHLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCL
FRVGGAAVLLSNRSQDRVRSKYELTQLVRTHKGASDKHYTCADQKEDDKGIVGVSLSREL
TIVAGDTLKTNLTALGPLVLPLSEKLRFIISIVKSRLFRLKSSPYVPNFKLCFEHFCIHA
GGRALLDAVEKGLGLSEVDLEPSRMTLHRFGNTSSSSLWYELAYIEAKCRVKHGDRVWQL
AFGSGFKCNSIVWSALRTISASETLVGNPWGDSVHKYPVHVT
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatttcaagtttcctctgcttatactgttcgttctatatttttcccagcttcat
ctacttcagtttcaccatgacttcttctcttcttttccggtcaagatcggtctactcatc
atatccatcctcctctatgcttactcaagcacacggtctaaaccagtttaccttgtcgac
ttctcatgtcaccaacccaccgactcatgcaaaatctcatccgaaacgttcttcaacatg
gccaaaggtgctaaactctacaccgaagaaacaatccaattcatgacgaggatactaaac
cggtccggtttaggagatgatacgtacgccccacgttgcatgttgacctctccaccaaca
ccatcaatgtttgaggccagacatgaagccgaattagtcatattcggagctcttaactcg
ctattcaagaaaacaggagttgaaccgagagaagttggaatcttcattgtaaattgcagc
ttgtttaaccctaacccatctctctcttccatgatcgtaaaccggtacaagctcaaaacc
gacgtgaaaacatacaatctctccggtatgggatgcagcgccggcgcaatctcggtagat
ctcgccacgcatcttcttaaagcaaaccctaatacctatgcagtcattgttagcacggag
aacatgactcttagcatgtatcgaggcaacgaccggtccatgctggtccctaactgtcta
tttcgagtaggaggtgcggcggttttgctctcaaaccggagccaagacagagttcggtct
aagtatgagttgactcaactcgttaggacccacaaaggcgctagcgacaaacattacact
tgtgctgaccaaaaagaagacgacaaaggtatcgttggagtatcactatctagagaacta
accattgttgctggtgacacgttgaagacgaatctaaccgcacttggtccccttgttctg
cctttatctgaaaagctccggtttattatctctattgtaaagagtaggctttttaggtta
aagagcagtccatatgtcccgaattttaaactatgtttcgagcacttctgtatccacgct
ggtggtagagcgttacttgacgcggttgaaaaaggtcttggcctcagtgaggtcgatctc
gagccgtctcggatgactttgcaccggtttggaaacacttcaagctcgtctctgtggtac
gagctagcttacatagaggctaagtgtcgggtcaagcatggagatcgggtttggcagttg
gcgttcgggtcgggatttaaatgcaacagtattgtgtggagtgcattgagaacgatttcg
gcgagcgagacactggtgggaaacccgtggggtgactcggttcataagtatccggttcat
gtgacataa
DBGET
integrated database retrieval system