Raphanus sativus (radish): 108812579
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Entry
108812579 CDS
T06014
Name
(RefSeq) RGG repeats nuclear RNA binding protein C
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108812579
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108812579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
GRP
GEMI5_RBS
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
108812579
NCBI-ProteinID:
XP_018440370
UniProt:
A0A6J0JX91
LinkDB
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Position
6:19918956..19921309
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AA seq
344 aa
AA seq
DB search
MSTLNPFDLLGGDAEDPSQIVVSLPKKVEKAAPVQPPAKGAKVHTKQPPTSQAVRESRNA
PSGGRGGGGAGRGPPRGSFNPGGDRLHDPKDGERTGGFRGYRESGGGRGGQRGGFANGRA
GDVEGRPKRAFERRSGTGRGNDLKREGGGRGNWGTPEDDIPPPTEEATTEVEESSVAEKE
GGEDNTTDAKNEAPADEEKEKEPEDKEMTLEEYEKILEEKKKALQATKVEERKVDTKVFE
SMQQLSSKKTNNEEIFIKLGSDKRKDASEKEEKAKKSLSINEFLKPAAGERYNPRGGYRG
RGGGRGQRDGGGRNGGCGQRDEKVNGGAPAPAIGDSAQFPSLGK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactttgaacccgtttgatctcttgggaggtgacgctgaggatccaagccagatt
gttgtgtctttgccgaagaaggtcgagaaagcagctcctgtgcagcctcctgctaagggt
gctaaggttcataccaagcagcctcctacttctcaagctgtgagagagtcaaggaatgct
ccttcaggaggtcgtggtggtggtggtgcgggacgtgggcctcctcgtggttcatttaac
ccgggaggagacagacttcatgatccaaaggatggagaaaggactggtggattccgtgga
taccgcgaaagtggtggtggccgtggaggtcaacgtggtggatttgccaatggtagagct
ggtgatgtggaaggccgcccaaagagggcctttgagcgccgtagcgggacaggtcgtggt
aatgacctgaaacgtgagggtggtggtcgtggaaactggggtacccctgaagatgatatt
ccacctccaacggaggaagccacaacagaggttgaggagagctctgttgctgagaaggaa
ggcggtgaggacaacaccaccgatgcaaagaatgaggctcctgctgatgaggaaaaggag
aaagaacctgaagacaaggaaatgacattggaagagtatgagaaaattctggaggagaag
aagaaagctctgcaagccacaaaggttgaggaaaggaaagttgataccaaagtgttcgag
tctatgcagcagctctctagcaagaagaccaataacgaggaaatcttcatcaagctggga
tccgacaaacgcaaagatgcttctgagaaagaagagaaggctaagaagtctttgagcatt
aacgagtttttgaagccggctgctggagagagatacaacccaagaggtggttaccgtgga
agaggaggaggccgtggacagagagatggaggaggccgcaatggtggttgtggacagaga
gatgaaaaagtgaacggaggagctcctgctccggccataggagacagtgctcagttccca
tcgttgggcaaatga
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