Raphanus sativus (radish): 108812653
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Entry
108812653 CDS
T06014
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108812653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108812653
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108812653
03012 Translation factors [BR:
rsz03012
]
108812653
04131 Membrane trafficking [BR:
rsz04131
]
108812653
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108812653
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108812653
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108812653
Translation factors [BR:
rsz03012
]
Eukaryotic type
Elongation factors
108812653
Membrane trafficking [BR:
rsz04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108812653
Exosome [BR:
rsz04147
]
Exosomal proteins
Proteins found in most exosomes
108812653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FcpA
AAA_22
Motif
Other DBs
NCBI-GeneID:
108812653
NCBI-ProteinID:
XP_018440480
UniProt:
A0A6J0JXJ5
LinkDB
All DBs
Position
6:complement(47275228..47277299)
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGMLKPGMVVTFAPSGLTTEVKSVEMHHESLVEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAVKKGAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagttccacatcaacatcgtggtcatcggccacgtcgactcgggaaaa
tccacgaccaccggtcacttgatctacaagctaggcggcatcgacaagcgtgtcatcgag
aggttcgagaaggaagccgctgagatgaacaagaggtctttcaagtacgcgtgggtcttg
gacaagctcaaggccgagcgtgagcgtggtatcaccatcgacattgctctctggaagttc
gagaccaccaagtactactgcaccgtcatcgacgctcccggtcatcgtgatttcatcaag
aacatgatcactggtacctcccaggctgattgtgctgttttgattattgattccaccact
ggtgggtttgaggctggtatctctaaggatggtcagacgcgtgagcatgctcttcttgct
ttcacgcttggtgtcaagcagatgatttgctgctgtaacaagatggatgctactactcct
aagtactcaaaggctaggtacgatgagattatcaaggaggtgtcttcttacttgaagaag
gttggttacaaccctgacaagatcccgtttgtccccatctctggtttcgagggtgacaac
atgattgagaggtccaccaatctcgactggtacaagggaccgactctcctcgaggctctt
gaccagatcaacgagcccaagaggccatcagacaagcccctccgtcttccactccaggat
gtttacaagatcggtggtattggaacggtgccggtgggtcgtgtcgagactggtatgctc
aagcctggtatggttgtgactttcgctccttcggggttgaccactgaggttaagtctgtt
gagatgcaccacgagtctcttgtggaggcgcttccaggtgacaatgttgggttcaatgtc
aagaacgttgctgtaaaggatcttaagcgtgggtatgttgcatccaactccaaggatgat
cctgctaaaggtgctgctaacttcacctcccaggttatcatcatgaaccaccctggtcag
attggtaacggttacgctccggttcttgattgccacacgtcccacattgctgtcaagttc
tctgagatcttgaccaagattgataggcgttctggtaaggagattgagaaggagcccaag
tttttgaagaatggtgatgctggtatggtgaagatgactccgaccaagcccatggttgtt
gagactttctcagagtacccgccgcttggacgtttcgctgttagggacatgaggcagact
gttgcagtcggtgtcatcaagagcgttgacaagaaagacccaaccggagccaaggtgacc
aaggctgccgttaagaagggtgccaagtaa
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