Raphanus sativus (radish): 108812680
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Entry
108812680 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor 3.4
KO
K05387
glutamate receptor, ionotropic, plant
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
108812680
Ion channels [BR:
rsz04040
]
Ligand-gated channels
Glutamate (ionotropic)
108812680
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
108812680
NCBI-ProteinID:
XP_018440511
UniProt:
A0A6J0JZC6
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Position
1:31434..34695
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AA seq
955 aa
AA seq
DB search
MMRGGVSMVKAVRLVLLCVSVLWVFPEECAGKSHSSRNSSSSSPSPPILQRPSSVNVGAL
FTYDSFIGRAAKPAFKAAMDDVNADQTVLKGIKLNIVFQDSNCSGFIGTMGALQLMETQV
VAAIGPQSSSIAHMISYVANELHVPLLSFGATDPTLSSLQYPYFLRTTQNDYFQMYAVTD
FVSYSGWRQVIAIFVDDECGRNGISVLGDALAKKRARISHKAAITPGADAGSIRDLLVSV
NLMASRVYVVHVNPDSGLNVFSVAKSLGMMGSGYVWIATDWLPTALDSMSPVDTDTMDLL
QGVVAFRHYTTESTMKRQFMERWKNLRAREGLNSYALYAYDSVWLIARALDVFFRQNNRV
TFSNDANLQKTKSSSSLQLSALSVFNEGEKFLEIILRMNHTGVTGPIRFDSERNRVNPAY
EVLNIEGTGPRRVGYWSNHSGLSVVPPETLYSKPPNTSTANQRLYGIIWPGEVTKPPRGW
VFPNNGKPLRIAVPNRVSYKDYVSKDKNPPGVRGYCIDVFEAAIELLPYPVPRNYILYGD
GXKNPSYDNLINEVVADNFDVAVGDITIVTNRTRFVDFTQPFIESGLVVVAPVKEAKSSP
WSFLKPFTIEMWAVTGAFFLFVGAIVWILEHRFNHEFRGPPRRQLITIFWFSFSTMFFSH
RENTVSSLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLTSRIEGIDSLITSNEPIGVQ
DGTFARNYLVNELNISPHRIVPLRNEEHYLSALQLGPKAGGVAAIVDELPYIEVLLTNSN
CKFRTVGQEFTRTGWGFAFQRDSPLALDMSTAILQLSEEGELEKIHRKWLNYKHECSMQI
SNSQNSQLSLKSFWGLFLICGITCFIALTFFFWRVFWQYQRLLPDTGDEERASEVTEASR
SGRGLRAPSFKELVKIVDKREADIKEILKQKSNNNKLKSSQSGAGSSHSQHSEIP
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaggaggagtctccatggtgaaagcagtgagacttgtcttgttatgtgtttct
gtcttgtgggtctttccagaagaatgtgctggtaaaagccattcctcaagaaactcttct
tcttcttctccttcaccaccaatactgcagaggccaagctctgtaaacgttggagctctg
tttacttacgactctttcatcggacgagcggctaaaccagcttttaaagcagcaatggat
gatgtcaacgctgaccaaaccgtactcaagggcatcaagctcaacattgtctttcaagac
tctaactgcagtggattcattggcaccatgggagctttgcagctgatggaaactcaagtg
gttgcagccataggtccacaatcctcaagcatcgctcacatgatctcctacgtagctaac
gagctccacgtacctctcttgtcattcggagcaacggatccaacgctctcctctctccag
tacccttacttcctccgcaccactcagaacgactacttccaaatgtacgccgtcacagac
ttcgtatcctactccggatggagacaagtcatcgccatattcgtcgacgacgagtgcggt
cgcaacgggatatcggttcttggcgatgcgttggccaagaaacgcgcgaggatctctcac
aaagctgccatcacgcccggtgcggacgctggctccatcagagacttgttggtctctgtt
aacctgatggcgtctcgtgtctacgtcgtccatgtgaaccctgactctggtttaaacgtc
ttctctgtggctaagtctctaggaatgatggggagcggttacgtttggatcgcaacggac
tggcttcccacggctcttgactccatgtcccccgtggatacggacacgatggatctcttg
caaggagtggttgcttttcgccattacacaaccgagagtaccatgaagaggcagtttatg
gagagatggaagaatcttagagcgagagaaggtctcaactcatatgcattgtatgcttat
gattctgtatggttgatagctcgtgcactcgatgttttcttcagacaaaacaacagagtg
acgttctccaacgacgccaatctgcagaagacaaagagtagtagcagtcttcagttatca
gcgctaagtgtgttcaacgaaggagagaagtttcttgagatcatactccgtatgaatcac
acgggtgtcacaggaccaatccggtttgattcggagagaaaccgggttaacccggcttac
gaagttctgaacatagaaggcacaggtccacggagagtaggctactggtctaaccattca
ggtctctcggtggtgcctccagagacgctgtactcaaagcccccgaacacatctacagca
aaccagcgtctctacggaatcatatggccaggggaagtgactaagcctccacgtggatgg
gtgtttcctaacaacggaaagccgctcagaatagcagtgcctaaccgcgtgagctataaa
gattacgtctccaaggacaagaacccacctggtgttagaggctactgcattgatgtcttt
gaagctgcgatcgagttgcttccttatcctgttccaagaaactatatattatatggagat
gganagaagaatccttcttatgacaatctgatcaatgaagttgttgcagataacttcgat
gtagctgttggagatataacgattgttacaaacaggacaagatttgtggatttcacgcag
ccgtttatagagtcagggcttgtggtggtggctccggttaaggaggctaagtctagtcct
tggtcattcctgaaaccattcactatagagatgtgggctgtcactggcgccttctttctc
ttcgttggagccatcgtctggattcttgaacaccgctttaaccatgagttccgtggccct
cctaggcgtcaactcatcaccatcttctggtttagcttctccacgatgttcttctctcat
agggagaacacggtgagctcattggggagactagtgttgatcatatggttattcgtggtt
ctgatcatcaactcaagctacacggctagtctcacttcgatactgaccgtccagcagctg
acatctcgaatagaaggaatagatagcttgataacgagcaacgaaccaatcggagttcaa
gacggtactttcgctaggaactatctggtcaacgagcttaacatatctcctcacaggatt
gttccgctgagaaacgaagaacactacctttccgctcttcaactcggtcccaaagccggc
ggcgtggcagccatcgttgacgagcttccttacatcgaagtccttctgacaaacagcaac
tgcaagttccgtacagtgggacaggagttcacacggacaggctggggtttcgcgttccag
agagactcccctttagctttagacatgtcgacggctatcttgcagctgtctgaagaagga
gagctggagaaaatccacaggaaatggcttaactacaagcacgaatgctcgatgcagatc
tcaaacagccagaactctcagctctcgctcaagagcttctgggggctgttcctcatctgt
ggcatcacttgcttcatagcgctcactttcttcttctggagggtgttctggcagtaccag
aggttgctaccggataccggggacgaggaaagggcaagcgaagttacagaggcgtctaga
tcagggagaggcttgcgagcaccgagtttcaaggagttggtgaagattgtggataagagg
gaagcagatatcaaggagatactgaaacagaagagtaacaacaataaactcaaaagtagc
caaagtggagctgggagttcacattctcaacatagcgaaattccttaa
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