Raphanus sativus (radish): 108812733
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Entry
108812733 CDS
T06014
Name
(RefSeq) auxin response factor 1
KO
K14486
auxin response factor
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108812733
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
108812733
NCBI-ProteinID:
XP_018440576
UniProt:
A0A6J0JXT2
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Position
6:complement(10667249..10675041)
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AA seq
657 aa
AA seq
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MAASNHPSGKPGGALSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGS
EQKMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPEADQSEPMSPDAPVQEPEKCT
VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIF
RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSH
SMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKNQKLAVGMRFKMRFEG
EEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNT
PSAHLPPQRNKRPRPPGLPSPTTAPSTPDGVWKSPADNPSSVPLFSPPAKTAAFGHGGNK
SFGVSIGSAFWPTHADGAAESFASALNNESPTTEKKQTSGNVCRLFGFELVENMNVDECF
SAASVSGAVAVDQPPSNEFDSSQQSESLNINQASGDPEKSSLRSPQESQSRQIRSCTKVH
MQGSAVGRAVDLTRSECYEDLFKKLEEMFDIKGELLQSTKKWQVVYTDDEDDMMMVGDDP
WNEFCGMVRKIFIYTPEEVKKLSPKNKLTVNVRMQSKTDADENGNAEGRSSSMAGSR
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggctagcaatcatccatctggaaaacctggaggggctttaagtgatgctttatgt
agggagctctggcatgcttgtgctggacctcttgtaaccctacctcgtgaaggggaaaga
gtttattatttccctgaaggtcacatggagcagcttgaggcatcaatgcatcaaggttcg
gagcaaaagatgccttcctttaatctcccatctaagattctctgtaaagtgatcaatatc
cagcgcagggcggagccagagactgacgaagtatatgcgcaaataaccttactgccagaa
gcggatcaaagtgagcctatgagcccggatgcccctgttcaagaacctgaaaagtgcaca
gtacattcattttgcaagacactaactgcttcggacacaagcacacatggtggattctct
gtgctacggagacacgcagatgattgtcttccacctttggatatgtcccaacaaccacca
tggcaagaactggttgcaactgatttgcacaataacgaatggcattttaggcacattttc
cgaggtcaaccaaggcgccatttgctaacaactgggtggagtgtttttgttagctcgaag
aaactagttgctggtgatgctttcatattcttaaggggtgagaatgaagagctccgagtt
ggtgttaggcggcacatgagacaacagactaatatcccgtcctctgtcatttcaagtcat
agcatgcacattggagtcctcgcaactgccgctcatgctattacaacaggaacaatcttt
tccgtcttctacaagccaagaactagtaggtcagagtttattgtgagcgtcaataggtat
ctcgaagctaagaaccagaagctggctgtaggcatgcgtttcaagatgagattcgagggt
gaagaagctcccgagaaaaggttcagtggcacaatagttggtgttcaggaaaacaaatct
tcggtctggcatgattctgaatggagatcgctcaaggttcaatgggacgagccttcatct
gtgtttcgtcctgaaagagtttcaccatgggaacttgagcccttagttgcaaacaatacg
ccttctgcacatcttcctccacaaaggaacaaacgaccgagacctcctggtttgccttca
ccaaccaccgctccatctactcctgatggtgtgtggaaatccccggcagacaatccttcc
tcggtaccgctattctctccccctgccaagactgctgcgtttggtcatggagggaacaaa
tcgtttggagtatccattggatcagccttttggcccactcatgcagatggtgcagctgaa
tcctttgcttcagcgctcaacaacgagtctcctactactgagaagaagcagaccagtgga
aatgtctgcaggctttttgggtttgagctggttgaaaatatgaatgtggacgaatgtttc
tctgctgcatctgtgtccggtgctgtcgctgtagatcaacccccatccaatgagttcgac
tccagtcagcaatctgagtcgttaaacatcaaccaagctagtggtgatcctgagaaatcc
tctctgaggtctcctcaagaatcgcaaagcaggcagatacgtagctgcacaaaggtacac
atgcaaggtagtgcggtaggcagagctgttgacttgacaaggtccgagtgttacgaggat
ctgttcaagaagctggaagagatgtttgacatcaagggtgaactcttacaatctaccaaa
aaatggcaagttgtttacacggatgatgaagatgacatgatgatggttggtgacgatcca
tggaatgagttctgtggaatggtgaggaagatatttatctacacacctgaggaagtgaag
aaactttcacccaaaaacaaactcacagtcaatgttaggatgcagtccaaaactgatgca
gacgaaaatgggaacgcagagggcaggtcatcgtcgatggccggatcaagatga
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