Raphanus sativus (radish): 108812818
Help
Entry
108812818 CDS
T06014
Name
(RefSeq) probable galacturonosyltransferase 9
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00520
Amino sugar and nucleotide sugar metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108812818
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108812818
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
108812818
Glycosyltransferases [BR:
rsz01003
]
Polysaccharide
Structural polysaccharide
108812818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
108812818
NCBI-ProteinID:
XP_018440688
UniProt:
A0A6J0JZ01
LinkDB
All DBs
Position
6:complement(3274257..3276699)
Genome browser
AA seq
548 aa
AA seq
DB search
MAVAFRGGRDGVGSGLRSFFTYRIFISALFSFLFLATFSVFLNSSRHHHPPHDHTLTSSL
GRTFLALQSDPLKTRLDLIHKQATDHLTLVNAYAAYARKLKLDASKQLKLFEDLAINFSD
LQSKPGLKPENNGNALEEDAFRVLEKEVKDRVKTARMMIVESKESYDTQLKIQKLKDTIF
AVQEQLAKAKKNGAVASLISAKSVPKSLNCLAMRLVGERINNPDKYKDAPFDSAVEDPSL
YHYAIFSDNVIAVSVVVRSVVMNAEEPWKHVFHVVTDRMNLAAMKVWFKMRPLDRGAHIE
IKSVEEFKFLNSSYAPVLKQLESAKLHKFYFENRAENATNIKFKNPKYLSMLNHLRFYLP
EMYPKLNKILFLDDDVVVQKDVTGLWKINLDGKVNGAVETCFGSFHRYGQYLNFTHPLIK
ERFNPNACAWAFGMNIFDLNAWRREKCTDQYHYWQNLNEDRSLWELGTLPPGLMTFYSKT
KSLDKSWHVLGLGYNPGVSMDEIKKAAVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEF
VQMCNFGL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggccttccgtggaggccgtgacggagtcggatccggacttcggagcttcttc
acgtaccggatcttcatatccgccttgttctcattcctcttcctcgccaccttctccgtc
ttcctcaactcctctcgccaccaccaccctcctcacgatcacacattgacgagtagttta
gggaggacgtttctggctttacaatcggatccactgaaaactaggttagatctcatacac
aagcaagccactgatcatctcacgcttgtgaacgcatacgccgcttacgctaggaagctc
aagctcgacgcctcgaagcagctcaagctattcgaagatctggcgatcaacttctccgat
ctgcagtccaaacctggtttgaaacctgaaaacaacggcaacgctctcgaggaggatgcg
ttcagggtgcttgagaaagaggtgaaagatagggtgaagacggcgaggatgatgatcgtc
gagtccaaagagagttacgatacgcagctcaagatccagaagctgaaggatacgatcttc
gctgttcaggaacagttggcgaaggcgaagaagaacggcgccgttgcgagcttgatctcg
gctaagtcggtccccaagagtcttaactgtttggctatgaggcttgttggggagaggatc
aataatcctgacaagtataaggacgctccgtttgattcggctgttgaggatccgagtctt
tatcactacgcgattttctctgataatgtgattgctgtgtcggttgtggtgagatcggtt
gtgatgaacgctgaggagccgtggaagcatgtttttcatgtggtgaccgatcggatgaat
cttgcagccatgaaggtgtggtttaagatgcgtcctttggaccgtggtgctcatattgag
attaaatctgtggaggagttcaagttcttgaactcttcttatgcgccggtcttgaagcag
ctggagtctgccaagttgcacaagttctactttgagaaccgggcggagaacgcgactaac
atcaagttcaagaaccccaagtatctctccatgctgaaccatctcaggttttacttgccg
gagatgtatccgaagctgaacaagatcctgttcttggacgacgatgttgtggtgcagaaa
gacgtgactgggttatggaaaatcaacttggatggaaaggtgaatggagctgttgagaca
tgctttggctcttttcatcggtatggtcagtacctgaatttcactcaccctctaatcaaa
gagaggtttaaccccaatgcttgtgcttgggcctttgggatgaatatatttgatctcaac
gcttggagacgcgagaaatgcaccgatcaatatcattactggcagaacttgaatgaagac
agaagtctctgggaattgggcactctgcctccgggactgatgacattctattcaaagacg
aaatcactggacaagtcctggcatgtgcttgggttaggctacaacccgggagtgagcatg
gatgagatcaagaaggcagcagtgatccattacaatgggaacatgaaaccatggctagac
attgctatgaaccaatacaagtctctctggactaaatacgtggataacgaaatggagttt
gtgcagatgtgcaattttggtctctag
DBGET
integrated database retrieval system
