Raphanus sativus (radish): 108812864
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Entry
108812864 CDS
T06014
Name
(RefSeq) transcription initiation factor IIB-1
KO
K03124
transcription initiation factor TFIIB
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108812864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108812864
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
108812864
Prokaryotic type
Archaeal type
TFB
108812864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
108812864
NCBI-ProteinID:
XP_018440748
UniProt:
A0A6J0JZ68
LinkDB
All DBs
Position
6:complement(51279889..51282122)
Genome browser
AA seq
312 aa
AA seq
DB search
MSDAYCTDCKKETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVG
GPTNPLLADSALTTVIAKTNGSSGDFLSNSLGRWQNRNGNAERGLLQAFKTIATMSDRLG
LVGTIKDRANEIFKRLEDQKSTRGRNQDALLAACLYISCRQEDKPRTIKEICSVANGATK
KEMGRAKDFIVKTLGLETGHSVEMGAIHAGDFMKRFCSNLGMSHQAVRAAEEAVKKSEEF
DIRRSPISIAAVVIYIITQLSDDKKPLKDIAIATGVAEGTIRNSYKDLYPHLQKIAPSWY
AKEEDLKNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgcgtactgtacggattgcaagaaggagacggagctggtggtcgatcactcc
gccggagacaccctctgctccgagtgcggcctggtcctggagtcgcactccatcgacgag
acctccgagtggcgcaccttcgcgaacgagtcgtccaacagcgatccgaaccgtgtcggc
ggcccgacgaacccgctcctcgccgacagcgctctgaccaccgtcatcgcgaagacgaac
ggctcctcgggggatttcctgtcgaattccctcgggaggtggcagaatcgtaacggcaat
gcggagcgtgggttgttgcaggcgtttaaaaccatcgccaccatgtctgacaggttgggg
cttgttggaactatcaaggatcgggctaatgagatatttaagaggctggaggatcaaaag
tcaaccaggggaagaaaccaggatgcgcttttggctgcctgcttgtacatttcatgtaga
caagaggacaagccacgaactattaaggaaatctgctctgttgctaatggagcgacaaag
aaggaaatgggaagagcaaaagactttatagttaagacattggggctggagactggtcac
tctgtggaaatgggcgccatacacgctggtgatttcatgaaaaggttctgctctaacctt
ggaatgtctcatcaagcggttagagctgctgaagaagctgtgaaaaaatctgaggaattt
gatataaggaggagtcctatatcaatagcagcagtagttatctatatcataacccagctt
tctgatgacaagaagcctctcaaagatatagctatagcgacaggagtagcagaaggaaca
ataaggaactcatacaaagacttgtatcctcatcttcagaagatagctccgagttggtat
gctaaggaagaggatcttaagaacctctctagtccttga
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