Raphanus sativus (radish): 108812887
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Entry
108812887 CDS
T06014
Name
(RefSeq) nuclear pore complex protein NUP107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108812887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108812887
03036 Chromosome and associated proteins [BR:
rsz03036
]
108812887
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108812887
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108812887
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
108812887
NCBI-ProteinID:
XP_018440771
UniProt:
A0A6J0K066
LinkDB
All DBs
Position
6:complement(5459007..5466116)
Genome browser
AA seq
1063 aa
AA seq
DB search
MDTDMDTSPSYFDPEGVLSVRDQFRRYRKRHSTSPHEEISSRSVSENRLLYDGNHIHSPT
NTALLLENIKEEVDNFHPLSAAVSPRSGDDDEALFRRVESQSLKACKVENDELAESGDTT
FALFASLFDSALQGLMPIPDLILRLEDSCRDVSQSIRYGSDVRHRVVEDKLMRQKAQLLL
GEAASWSLLWNLYGKATEEVPQELIMSPSTSHLEACQFVVNDHTAQLCLRIVLWLEDLAS
KSLDLERKVRGSHVGTYLPNAGVWHHTQRYLKKNGSAADIVRHLDFDSPTREQARLLPDD
KKQDESLLEDVWILLRAGRIEEACDLCRSAGQPWRAATLCPFSGMDMFPSVEALVKNGKN
RTLQAIELESGFGNQLRLWKWASYCASEKIAEQDGGKHEVAVFANQCSNLNRILPICTDW
ESACWAMAKSWLDVQVDLELAQSKPGLTEKFRSCLDESPDTMQNGCQASLGPEDWPLHVL
NQQPRDLPALLQKLHSGKMVHDAVVRGCKEQHRQIQMTLMSGNISHLLDILWSWIAPLED
DQSNFRPHGDPHMIKFGAHLVLVLRYMLADEIKDREKLSNVGDLILHMYSMFLFSKQHEE
LVGIYASQLARHRCIELFVHMMELRMHSSVHVKFKIFLSAMEYLPFSHVDDSQGNFEEIV
DRVLSRSREIKLAKYDPSVDVAEQHRQQSLQKAIAIQWLCFTPPSTIKDVKDVTSKLLLR
SLMHSNILFREFALIAMWRVPATPVGAHTLLSFLAEPLKQLSENPETLEDYVSENLQEFQ
DWNEYYSCDAKYRNWLKFQLENAEVTELSEEENQKVVVAANETLDSSLSLLLRKDNPWLT
FLEDDVFESEEHMFLELHATAMLCLPSGECLRPDATVCATLMSALYASVTEDVVLDRQLM
VNVSISSRDSYCIEVVLRCLATEGDGLGPHNANDGGILSAVAAAAFKGELTRFQAGVTMD
ISRLDAWYSSKEGSLETPATYIVRGLCRRCCLPELVLRSMQVSVCLMESGNPPEYHDELI
ELVASDETGFLSLFSQQQLQEFMLFEREYRLSQLELQEELSSS
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggacacggatatggacacttctcctagctacttcgaccccgagggcgtcctcagcgtc
agggatcaattccgtcgctaccggaagagacactctacatcgccgcacgaggagatctcg
agtcggagtgtcagtgagaataggttactgtacgatgggaatcacatccatagtccgacg
aacactgccttgcttcttgagaacattaaagaagaggttgataactttcaccctctctct
gctgctgtttccccgaggagtggtgacgacgatgaggctctgtttcgtagagttgagagt
cagtcactgaaggcttgcaaggttgagaatgatgagttggcggagagtggagatactact
tttgctctgtttgcttctctgtttgattctgctcttcaaggactgatgcccattccggat
ctaatattgagacttgaggactcatgcagggatgtttctcaatcgattaggtatggatca
gatgtaagacatcgggttgtggaggataaacttatgagacagaaggctcagcttttgctt
ggtgaggctgcctcctggtcacttttatggaacctatatggaaaagctactgaagaagtt
ccgcaggaattgattatgtccccatcgacatctcatttggaggcttgtcagtttgttgta
aacgaccatacagctcagctatgccttcggatagtcctgtggctggaagatctagcttca
aaatcacttgatttggaaagaaaggtgaggggatctcatgtgggtacttatcttcctaac
gctggagtgtggcatcacacacaaagatatctcaagaaaaatggctctgctgctgatatt
gtacgccatttggactttgattccccaactcgtgaacaagctcgtcttcttcctgatgat
aaaaaacaagatgaatctcttcttgaggatgtttggattttgttaagggctggaagaata
gaggaggcctgtgatctctgcaggtccgctggccagccatggagagctgcaactttgtgc
cccttttctggaatggacatgtttccttctgttgaagcgttggtaaagaatgggaaaaac
aggactctccaggctatcgagctggaaagtggatttggcaatcaactgcgtctttggaaa
tgggcttcgtactgtgcatcagagaaaattgcagagcaggatggcggcaagcatgaagtt
gctgtttttgcaaaccaatgcagcaacctgaaccgcatcttgccaatttgtactgattgg
gagtcagcttgctgggcgatggcaaaatcatggcttgatgttcaagttgatctagaactc
gcccaatcaaagccaggcttgacagaaaagtttagaagttgtcttgatgaaagccctgac
actatgcaaaatggttgtcaggcttcacttggaccagaagattggccgctccatgttctg
aaccagcaaccccgtgaccttcctgctcttcttcagaaactccattcagggaaaatggta
cacgatgcggttgtcaggggatgcaaagagcagcaccgacaaattcagatgacccttatg
tcggggaatatctcacatcttcttgatatactatggtcatggatcgcgcccttagaagat
gatcaaagcaactttaggccccatggcgatcctcatatgataaagttcggtgctcacttg
gtgcttgttcttaggtatatgcttgctgacgaaatcaaggacagggagaagctcagcaat
gttggtgatcttattcttcatatgtattcgatgtttctattttcaaaacaacacgaagaa
ctcgtaggaatatatgcttctcagcttgctcgtcaccgctgcatcgaactttttgtacac
atgatggagctaaggatgcatagcagcgtacatgtgaagttcaagatcttcctatccgct
atggaatacttaccattctctcacgtggatgactcgcaaggaaattttgaggaaatagtt
gacagggttttgtcaagatcccgggaaatcaaacttgcaaaatatgatccctcagttgat
gttgcagagcagcatcgtcaacagagtcttcaaaaagccatagccattcagtggctctgt
tttacacctccatctactataaaggatgtcaaggatgttacttctaaattactcctgcga
tctttgatgcacagcaacatacttttccgagagtttgctttgatcgccatgtggagagtg
cctgcaactcctgtgggtgcacacacgcttcttagttttcttgctgaacctctgaagcaa
ctctcagagaatccagagacactcgaggattatgtttccgagaatttacaggagttccaa
gactggaatgagtactattcctgtgacgcaaaatatcgcaactggctcaaattccaatta
gagaatgctgaagtcactgaattgtcagaagaggaaaatcaaaaagttgtagtagcagcc
aatgagactttggattcttctttgtcactgctcctcagaaaagacaatccctggttgaca
tttcttgaagacgatgtattcgagtcagaagaacatatgttccttgagttgcatgcaact
gcgatgctctgtttgccttctggtgaatgtttgcgcccagatgccactgtctgcgcgaca
ttaatgagtgcgctttacgcttctgtcacggaggacgttgttttggaccgtcagttaatg
gtaaatgtatcgatttcatcaagggacagctactgcatcgaggttgtgcttcggtgttta
gcaactgaaggggatggacttgggccacacaatgccaatgatgggggtattttaagtgca
gttgccgcagctgcttttaaaggtgagcttaccaggttccaggcaggtgttacaatggat
atatcacgcctagacgcttggtattcaagcaaagagggatcgcttgaaacacctgcaact
tatattgtccgcggtctctgtaggagatgctgtcttccagagctagttcttcgatctatg
caggtgtctgtttgtctaatggagtcgggaaatccacctgaatatcacgatgaactgatt
gagctcgtggcttctgatgaaactggttttctctctttattcagccaacaacaattacag
gagtttatgttgtttgagagagaatatcgtctgtctcaattggagctccaggaggaactt
tcatcctcttga
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integrated database retrieval system
