Raphanus sativus (radish): 108812907
Help
Entry
108812907 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108812907
04121 Ubiquitin system [BR:
rsz04121
]
108812907
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108812907
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108812907
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108812907
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Zf_IFT144_1st
zf-HC5HC2H
zf-C3HC4_3
RPA43_OB
VPS18_RING_C
DDB_G0273449
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
108812907
NCBI-ProteinID:
XP_018440799
UniProt:
A0A6J0JYH3
LinkDB
All DBs
Position
6:36144944..36147505
Genome browser
AA seq
339 aa
AA seq
DB search
MEEEANATRYWCHMCSQTVNAVVMEEEIKCTLCRSGFIEEMDEDHHHSSSDGNDRRRATN
NASILAPILMEMINNSSSSSATRNLSAETLNEIIRNNNNRPRSVSVVQLLHGVRPLEPES
SDDNNNNNNNNDGADGERERGRMIFIDPHRQFIAIPSSLVRDSIPAGSSLSDYFIGPGFE
ALLQRLAENDPNRYGTPPARKEDVESLATVRIEDPCLQCSVCLDDFEVGIEAKQMPCKHS
FHADCLLPWLELHSSCPVCRYQLPTADETNKTTGEETNDNSEVSESSATGSSQGTENSDA
NSHEGEEENDDGNRNAFSIPWPFSSFISSLFSQDRNSSN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaagcaaacgcaacgagatattggtgccacatgtgttcccaaaccgtgaac
gcggtggtgatggaagaggagatcaaatgcaccctctgtcgaagcggctttattgaagag
atggatgaggatcatcaccactcttcttcagatggcaatgatcggaggagagcaacaaac
aacgcttcaatcttggctcccatcttaatggaaatgatcaacaactcttcgtcttcttct
gctacaaggaaccttagtgctgagactctgaacgaaataatccgaaacaacaacaacaga
ccacgctctgtttccgttgtgcaacttcttcatggagtaagaccacttgaacctgagagt
agcgatgataacaacaacaacaacaacaacaacgatggggcggatggagagagagagaga
ggacgcatgatcttcatcgatccgcatcgtcagttcatcgccatcccgagctctctcgtt
agggattccatccctgctggttcttctctgagcgactatttcatcggtcctggattcgaa
gccctgcttcagcgcttggcggagaatgatcccaacagatacggaactcctccagctcgt
aaagaagatgttgagtctttggctactgtcagaatcgaggatccttgtctgcagtgttct
gtgtgtttggatgatttcgaggttgggatcgaggctaaacagatgccatgtaagcatagc
ttccatgctgactgcttgctcccgtggcttgagcttcacagttcatgccctgtttgtagg
tatcagttacctaccgcagatgagactaataagactaccggtgaagaaacaaatgacaac
agtgaagttagtgagtcctctgctacaggcagtagccagggaactgagaacagcgatgca
aacagtcacgaaggagaagaggagaacgatgatggtaataggaacgcattctcgatccca
tggccgtttagcagcttcatctcgtccttgttctctcaagacaggaattcatcaaattga
DBGET
integrated database retrieval system
