Raphanus sativus (radish): 108813028
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Entry
108813028 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108813028
KO
K17925
sorting nexin-13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rsz04990
]
108813028
Domain-containing proteins not elsewhere classified [BR:
rsz04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108813028
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
108813028
NCBI-ProteinID:
XP_018440956
UniProt:
A0A6J0K0K6
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Position
6:complement(27426725..27432211)
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AA seq
1013 aa
AA seq
DB search
MKAMETIQDLIEEAKIRTVWWALCIFSVTYLLTHTSKSMWMNLPMAILILGALRILLNQI
EFRWKVMPDPRQSRLSYPAKKQLSLNDPRLSTTPPPPRWKKNIDSPVVEAAINDFIDKIL
NDFVINLWYSLITPDKEAPELIRGVIMDALGEISVRVKEINIVDLLTRDIVDLIGDHLEI
FRRNHAAIGTDVMKTLSSEERDERLKYHLMASGELYPALISPESEYKVLQRIVAGILSVV
LRPREAQCPLVRTIAREIVTCLVVQPLLNLAAPERINEVLEIIINIIKEGNFEQFSGEEQ
SVYSASLSASDSQAKSMNLAKVNEQETPSVDDERHPELRIQQNSGDWARMLEVATQRRTE
VLTPENLENMWTKGRNYKKKEYKKSLKTGSSVSSPVEAKQKTHSSIPGTTSGAEEKALVH
LPPRVSVDKHSLTQIEEDISRTASCEGGRHMYEVGVRQESPSDGNKNRFKRSNSTSDLLK
PETRLALLGVGEGPLITDFYTSTYIKHNENHTCDSKSPNIVLNKESQQCSKLKCRVLGAY
FEKMSSKSFAVYSIAVTDTENKTWFVKRRYSNFERLHRQLKEIPNYNLQLPPKRIFSSST
EDAFVHRRCIQLDKYLQDLLSIANVAEQYEVWDFLRESSKNYSFGKSSSVMKTLAVNVDD
AMDDIVRQFKGVSGGLMRKVVGSPLEETDQAPARHLSWSVHDMNTHLAKETATESMHSSI
SDNEDIDKLGENTQGEGSLVSEANGWHSDNELDSKYFQPRVVRRLGEPEKMPLDKENDYK
AKSEVRGFSDSQHADPSTSVAPSPTGVPEWNPPNVSVPILNLVDKVFQLNRRGWLRRQVF
WISKQILQLVMEDAVDDWLLREVCWLRNEDTVAHGIRWAQDLLWPDGVFFTRVGDGQEAS
DRTDPSDNAFQIAGQLGGMKDVKPSTFEQQFEASRRASEIKKFLFDGAPTALVGLVGHNQ
YRRCARDIFYFTQSNICIKQLTFAILELLLRTVFPELKDLLRDIRENSNGRSE
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgatggagactatacaagatctgatcgaagaagctaaaatacggaccgtctgg
tgggctttgtgcatcttctccgtcacatacttgttgacccatacaagcaagtctatgtgg
atgaatttgccaatggcaatcctcattcttggcgctcttcggattcttcttaatcagatt
gagttcagatggaaagttatgcctgatccaagacagagcaggctctcttatcccgccaag
aagcagctgtccttgaatgatcctcgtctttccactaccccaccacctcctaggtggaag
aagaatatcgactctcctgttgtggaagctgccatcaatgactttatcgacaagatcctc
aatgatttcgttataaatttgtggtactctttgatcaccccggataaagaggcccctgaa
ctcatccgtggagttatcatggatgctcttggtgaaatttcagtcagggtaaaagagatc
aatatcgtcgacctgctaactagggatatagttgatctgataggtgatcatttggagatt
tttagaagaaaccacgctgctataggtactgatgttatgaagacattgtcatctgaagag
agagatgaaagattgaagtaccatcttatggcttctggggagctttatcctgcactcatt
tcgcctgagagtgagtacaaggttcttcagagaatagtcgctggcatattatctgtggtt
ctcagaccgcgagaagctcagtgccctcttgttcgaacgatagctagagagattgttact
tgcttggtagttcaacctcttttgaatttagcagcccccgagcgtatcaacgaagtgctt
gagatcattatcaatattattaaagagggaaactttgagcagttttctggggaagaacag
agtgtttactctgcctcattgtcagcctccgatagccaagcaaaaagtatgaatttggca
aaagttaatgagcaggaaacaccatccgtagacgatgaaagacatcctgaactgcgcatt
caacagaactctggtgattgggctcggatgctagaggtcgcaacgcaaaggagaaccgag
gttcttactcccgaaaacctcgaaaacatgtggaccaaaggaagaaactacaaaaagaaa
gagtacaaaaaatctctgaaaacgggttcttccgttagtagtccagtagaagccaaacag
aaaacccatagttccataccggggactaccagtggtgcagaagaaaaagcattggtacat
ttgccccctagagttagcgttgataagcactcactaacgcagatcgaagaggatattagt
agaacagcttcatgtgaaggagggcgccatatgtatgaggttggtgttagacaggaatct
ccttcggatggaaataagaacagatttaagagatctaatagtacgtcggatcttttaaaa
cctgaaacgaggctggcactattaggggtcggtgagggtcctcttatcacagatttctac
accagtacttacatcaagcacaatgagaatcatacttgtgatagtaaatctccaaacatc
gttcttaacaaagagagtcagcaatgctcaaaactgaaatgtcgggttcttggagcttat
tttgagaagatgtcatcaaaatcatttgcagtatattctattgcggtgacagatacggaa
aacaaaacttggtttgttaagagaagatacagtaatttcgagcggttgcatcgccaactc
aaagaaatcccgaattacaatttacagttgcctcccaagcgtatattctcatcaagcacc
gaagatgcttttgttcatcgccgctgtattcagctggacaagtatctacaagatctcttg
tctatagctaatgttgctgaacaatatgaagtttgggattttctaagggagtcctcaaaa
aactattcatttggaaagtcttcatcagtgatgaaaactcttgcagttaacgttgatgat
gccatggacgatattgtacgtcagtttaaaggggtctcgggtggccttatgcgcaaggtt
gtaggatctccacttgaagaaactgatcaagctcccgcgcgccacctctcctggagtgta
catgacatgaacactcacctcgctaaggaaactgcaactgaatcgatgcacagcagcatt
tccgataatgaagacattgacaaacttggagagaacacccaaggggaaggtagtcttgtt
tcagaagctaatgggtggcactcagataatgaactggactctaagtatttccaaccaaga
gtggtcagacgtcttggagagcctgagaaaatgcccttggataaggaaaatgattataaa
gcaaaatctgaagtaagagggttcagcgattcgcagcatgccgatccatccacaagtgtg
gctcctagtcctactggcgtacctgagtggaatccgcccaatgtcagtgtgccgattttg
aacctagtcgacaaggtgtttcagttaaatagaagaggctggttaaggaggcaagttttc
tggatatcaaagcaaatattacagctagttatggaagatgctgtggatgactggctcctg
agggaagtgtgttggctgcggaatgaagacacagtagctcatggaatacgttgggctcaa
gatcttctttggccagatggcgtgttctttaccagagtgggtgacggtcaagaggcatcg
gataggaccgaccctagtgataatgctttccaaatagcaggccaacttggtggcatgaag
gatgttaaacccagtacctttgagcagcaattcgaagcttcacgtagggctagtgaaatc
aagaaattccttttcgatggggcgccaacagccttagtgggcttggtagggcacaatcag
tacaggagatgcgcaagagacatcttctatttcactcagtcaaacatatgcataaagcaa
ctaacatttgcaatactggagttgctactccgaacggtattcccggagctgaaagatctt
ctgagagacataagggagaactcgaacggtcggtcagagtaa
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