Raphanus sativus (radish): 108813068
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Entry
108813068 CDS
T06014
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 3
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108813068
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
108813068
Ion channels [BR:
rsz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108813068
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
108813068
NCBI-ProteinID:
XP_056844050
UniProt:
A0A9W3BXT5
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Position
6:52947759..52951383
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AA seq
707 aa
AA seq
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MEMMNLNKNKFVKITKNEDSWNRPTRPSVTSVIKKTVRRSFEKSSEKIRTFKQQPLTFHS
SKKNEDKKKIIRVMNPNGSYLQNWNKIFLLLCVVALAFDPLFFYIPVVDHARFCLRLDTK
LEAVACVFRTFIDVFYLVHMLFQFNTGFIAPSSRGFGRGELVQSSKEIAMRYLKSYFIID
VLSILPIPQVVVLAIVPSMSRPASLVTKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLV
TETAWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWRETCANISRCVHANLYCSDGKD
NSQYLIGSCPLMDPEEIKNSTVFNFGIFAEALQSGVVESMDFPKKFFYCFWWGLRNLSAV
GQNLKTSDFEGEIIFAIIICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMS
HRMLPDDLRKRIRKYEQYKWQETRGVEEEALLSSLPKDLRKDIKRHLCLNLLKKVPWFKA
MDDRLLDALCARLNTVLYTENSYIVREGEPVEDMVFIMRGNLTSTTTYGGQTGFFNSAHL
KAGDFCGDLLTWALDPNTSHLPISTRTVQAQTEVEGFVLSAEDLKFFSTQYRRLHSKQLR
HTYRCYSVQWQTWAACFIQAAWKRYCRRKLSRALREEEERLQYSLQTDDSSGGNKLNLGA
AIYASRFASHALRNVRANAAARNSMLPHMLSLLPQKPADPEFPMDET
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggagatgatgaatctaaataaaaacaagttcgtaaagattactaaaaatgaagattct
tggaacagacctactagaccatcagtaacttcagttataaaaaaaacagttagacgcagc
tttgagaaaagctcagagaaaatcagaacctttaagcagcagccattaacgtttcattct
tcaaagaagaacgaggacaagaagaagataatacgagtgatgaaccccaacggctcttat
cttcaaaactggaacaagatcttcttgcttctatgtgtcgtagcgttagcatttgatcct
ctgttcttctacatccccgttgtggatcacgccaggttctgccttagactagacacaaaa
ctcgaggcagtggcgtgtgttttccgcactttcatcgacgttttctacttggttcacatg
ttgtttcagtttaatactggcttcatcgctccttcttctcgtgggtttggtagaggagag
cttgttcagagttctaaagaaatcgctatgagatacctcaagtcatattttataatcgat
gttctttcgattctccctattcctcaggttgttgttctagctattgttccatcgatgagt
cgaccagcgtcattggtaacaaaagagctattgaaatgggttatcttttgtcaatacgtt
ccgaggatcgcacggatctatccgctttttaaagaagtaacaagaacgtccggtttggtc
actgagactgcttgggctggagctgctttgaacctgttcctctacatgttagctagccat
gtctttgggtctttttggtacttgatatcgatagaaaggaaagacagatgctggcgtgaa
acgtgtgctaatattagtagatgtgtccatgcgaacttgtactgttcagatgggaaagat
aatagccagtatctaataggttcttgcccgttgatggatccagaggagatcaaaaactcg
acggttttcaactttggtatattcgctgaagcattgcagtctggagttgtggagtcgatg
gacttccctaagaagtttttctattgtttctggtggggtcttcgcaatcttagtgctgtg
gggcaaaacttgaagacaagtgactttgaaggagagatcattttcgcgatcatcatttgt
atctctggactagtcctgtttgctcttctcataggaaacatgcagaaatatttgcaatca
actacggtaagagttgaggaaatgagagtgaaaaggagagatgcagagcaatggatgtct
caccgtatgttgccagatgatctgagaaaacgtatccgtaaatacgaacagtataaatgg
caagaaaccagaggagttgaagaagaagctcttctctctagtcttccaaaagatctcaga
aaggacattaaacgccatctttgtttgaatctcctcaaaaaggtgccgtggtttaaagcc
atggatgatcggctactagacgcactttgtgcacgtttgaatacagttctgtacacggag
aacagttacattgtgcgtgaaggtgaaccggttgaggatatggtgtttataatgagaggc
aatcttacaagtacaactacttatggtggccaaaccggattcttcaattctgctcatttg
aaagccggtgatttctgtggagatcttctcacttgggcactggatcctaacacttcccac
ttgcctatctctactagaaccgttcaagctcagacagaagtcgaaggctttgtcctctcg
gctgaggatctcaaattcttctctacacagtaccgtcgcctccatagcaagcaactacga
cacacgtacaggtgttattcagtgcagtggcagacatgggcagcatgtttcatacaagca
gcatggaagagatactgtagaaggaagctctcaagggctttacgtgaagaagaagaaaga
ctacaatactctcttcagacagatgattcatcaggaggcaataaacttaacttaggtgct
gcgatttatgcgtcgaggtttgcttctcatgctctgaggaatgtaagggcgaatgcagcc
gcacggaactctatgcttcctcatatgctatctttattgcctcagaagccagctgatcct
gagtttcctatggatgaaacctaa
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