KEGG   Raphanus sativus (radish): 108813200
Entry
108813200         CDS       T06014                                 
Name
(RefSeq) transportin MOS14 isoform X1
  KO
K15436  transportin-3
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03013  Nucleocytoplasmic transport
rsz03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108813200
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108813200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsz03016]
    108813200
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    108813200
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd IBN_N TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_4th
Other DBs
NCBI-GeneID: 108813200
NCBI-ProteinID: XP_018441190
UniProt: A0A6J0JZM8
LinkDB
Position
6:complement(36568295..36574908)
AA seq 1009 aa
MEMELQRKVAEAIHVLNHDPLSSNRVAANQWLVHFQQTPEAWDVSTSLLTSPIVSLFDLQ
FFAAQILRRKIQNEASNLQSNAKDALLNALLVSAKRYSSGVPQLLTQICLALSALLLHAD
PYSKPFDKLMFALQNLQAHDDGNVVLLELLTVLPEEISDTRHLSHHSDLRQQLLSHTSMV
LDFLLQQSEKQFVSPLYPHDNNKKILRCLLSWVRAGCFSEIPQGAVPSHPLLNYVFNALQ
GSTFDLAIEVLVELVTRHEDLPRVLLYKVQLLRDTLLKPALINADPKVVSGLACLMSEIG
QAAPCLIVEASSEALILTDALLSCVSFPSEDWEIADSTVQFWSTFATYILSLGGNRQNDR
NRVKEIFSPVFSALVDALVLRAQVDEFTSSDESPGLDLPDGLLHFRNNLLELLVDICQLL
HPTTFVSKLFFGGLPSDVSMPLREIEAKLFALNAVSEIILQEGEAFDFSLIAQLVSAFSV
RPSSELKGFLCVVYRSLADVVGSFSRWISVSPSNARPLLLFLAGGISEPICTHACASALR
KICEDAPAVIQETSNLEILMWIGECLEQWNLAFEDEEEVISAITVILGSVANKELQNKLL
TQLLSSSYGVLSTLVDDDVESSGRQNPATYTRVLSAVTRGLYRIGTVLSHLATSLSSVPV
ADGPILSLLTVFWPILEKLFRSEHMESGSLAAAACRALSVAVQSSGEHFMLLLPSVLECL
SRNFLSFQSQECYIRTACVIAEEFCHKEEYGSLFITTFERFTQASSLMGINSSYICDQEP
DLVEAYVNFASALIRGCHKQEVLGTCGTLIEISFQKAAICCTAMHRGAALAALSYLSGFL
EVSLSSMIESVNCKSEGSFSVVSVQVVSHCGEGLLSNLVYALLGVAAMSRVHKCSTILQQ
LAAICSLCERTSWKEILCWKSLQEWLNSAVWALPSEYLKQGEAEKIVREWSEALGGAGID
YLENKSCNFGSNNSSLGGGHMQGKHGRALKRLVRDFADSHRNDPNLNMI
NT seq 3030 nt   +upstreamnt  +downstreamnt
atggaaatggagttacagaggaaagtagcagaagcaatccacgtcttgaatcacgatcct
ctctcttccaacagagtcgccgccaatcaatggcttgttcacttccagcaaactcccgaa
gcttgggacgtctccacctctctcctcacttctccgattgtctcccttttcgacctccag
ttcttcgccgctcagattctccgtcgaaagattcagaacgaagcatcgaatcttcaatct
aatgccaaagacgctcttctcaacgcacttcttgtatccgctaagagatacagctccggc
gttcctcagctattgacgcagatatgtttagctctctcggcgcttcttctacacgcggat
ccttactcgaagccctttgataagcttatgtttgcgcttcagaatcttcaggctcacgat
gatggcaatgtcgtcttgcttgagcttctcactgtccttcctgaagagatatctgacact
cgccatctttctcatcactctgatcttcgtcaacagttgctctcgcatacttccatggtt
ctagacttcttactccagcagtctgagaagcaattcgtctcccctctttacccgcatgac
aacaataagaaaatacttcgttgcttactgagttgggtccgtgctggatgtttctctgag
attccacaaggcgcagtgccatcacatccccttcttaactatgtcttcaatgctctgcag
ggttctacttttgatctcgccattgaggtgcttgttgaactcgtgactcggcatgaggat
cttcctcgggttttattgtacaaagtacagttgctcagagatacacttctaaaaccagct
cttataaatgctgatccaaaagttgtctctggcctggcttgcttgatgtctgagatcgga
caggctgcaccatgcttgatcgttgaagcaagttctgaagctcttattctgaccgatgcc
cttttgagctgtgtgtcatttccaagtgaagactgggaaattgcagactcgactgtacaa
ttttggtcaacttttgcaacgtatatacttagcctaggtggaaacagacagaacgaccga
aatcgtgtaaaagaaatattctcaccagttttctcagctttagttgatgcccttgtgctg
cgcgctcaggttgatgagtttacctccagtgatgagagtccagggctggacctgcctgat
ggcctgctgcattttagaaacaatcttcttgagctcttggtagatatatgtcagctactt
catcctacaacatttgtgagtaagttgttttttggtggcctgccttcagatgtttcaatg
cccttgagggagattgaggcgaagttgtttgctcttaatgcggtttctgaaattatcttg
caagagggagaagcttttgatttttcattgatcgcgcaattggtttctgcattctctgtc
aggccatccagcgaactcaagggatttttatgtgttgtatacagatcactggcagatgtt
gttggctccttttcaagatggatctctgtttctccaagtaatgctagacccttgctatta
tttcttgcaggagggatttctgaacctatttgtacacatgcttgtgcctctgctctgcgt
aaaatctgtgaagatgcaccagctgtaatccaggaaacatcaaacttagaaatcttaatg
tggataggagagtgtttggagcagtggaatttggccttcgaagatgaagaagaagtcatt
agcgctatcactgtaattcttggctcggttgctaacaaagagctacaaaataaattatta
actcaattgctttcgtcaagttatggagtcctctcaacacttgtagatgatgacgttgag
tcttctggtagacagaatccagccacttacacacgggtgttgagcgctgttacaagaggt
ctttacaggattggaactgtactcagtcaccttgcgacgtctctgtcatctgtccctgtg
gcggacggtccaattctttctttgttgactgttttctggcccatattggagaagctattt
aggtctgagcacatggagagtggaagtttggctgctgcagcatgccgtgctctttcagtg
gccgttcaatcgtcaggtgagcactttatgctgctactgcccagtgtacttgagtgtctg
tcgaggaactttctttcatttcaaagccaagaatgttacataagaacagcctgtgtaatc
gctgaagagttttgtcacaaggaggaatacgggtcattgtttatcaccacgtttgagaga
tttactcaagcatcatcactgatgggaataaattcgtcatatatatgcgaccaagaaccc
gatttggtggaagcatatgtgaatttcgcgtcagcattaatccgcggttgtcataagcag
gaagtgttgggtacttgtggaacacttattgaaatttctttccaaaaagcggctatttgt
tgtacagctatgcaccgaggtgctgctttagctgcactgtcgtacttgtctggtttcttg
gaggtttcgctttcttccatgattgaaagcgtgaattgcaaatcagaaggatcatttagt
gtcgtctccgtccaggttgtatctcactgtggagagggacttttgtctaacctagtctat
gctctacttggagttgcagctatgtcaagggtgcataagtgttcgacaatacttcaacag
ttagctgcaatctgcagtttatgtgagagaacttcatggaaagaaatcttgtgctggaag
tctctccaagaatggctaaactcagcggtgtgggcactcccaagcgagtatctaaagcaa
ggagaagcagaaaagatagtgagggaatggtcagaagctctgggaggtgcagggatcgat
taccttgagaacaaaagctgcaactttggaagtaataacagcagtttaggaggaggacat
atgcaagggaaacacggtcgagcattgaaacgattagtcagagattttgcagattctcat
cgcaacgatccaaatctaaacatgatatga

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