Raphanus sativus (radish): 108813269
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Entry
108813269 CDS
T06014
Name
(RefSeq) protein indeterminate-domain 11-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108813269
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108813269
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_6
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108813269
NCBI-ProteinID:
XP_018441285
UniProt:
A0A6J0JZX7
A0A6J0K2X8
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All DBs
Position
6:4343719..4347075
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AA seq
493 aa
AA seq
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MSNLTSASGDQASVSSGNRTEVSGSNYFPHHHQQEEQQQFIVPESQPQKKRRNQPGNPDP
ESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVY
VCPEESCVHNDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTCGTK
EYRCDCGTLFSRRDSFITHRAFCEALAEETAREVVIPQNQNHQPNPLMIQQSSSSSSHHH
QAQPTVNISSCSSSSHNIINSLHFETNHNGTNNSNTNSNHLHTFPMKIEQQQSNDHIISY
HQHIIPPWLTSPNPNPSNGGGGLFSLAASPAMSATALLQKAAQMGSTKSPPLPPNTDSER
PAHHNNNLTTKMASMMTSPSGFISSNNSNNQVLFQDYNASEFDHHGGEEAFDDTFGGFLR
TNVDTTTTSGSDKNKSGGGGGEGLTRDFLGLRPLMSHNEILSFAGLGNCINGSASDQLHP
KPWQGTQVGSNKR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatctaacatcagcttctggggatcaagcaagtgtctcttccggaaacagaact
gaagtaagtggttctaattacttccctcatcatcatcaacaagaagagcaacaacagttc
attgttcctgaatctcagcctcaaaagaagaggagaaaccaaccagggaatccagacccg
gaatcagaagtgattgctctgtcaccaaaaacactaatggcaacaaacagattcgtgtgt
gagatctgtaacaagggattccaacgagaccaaaatctacagcttcacaggagaggtcac
aatctgccatggaagctgaaacaacgatccaacaaagaagtgataagaaagaaagtgtat
gtttgtccagaagaaagctgtgtccacaatgacccatctcgagctctcggtgacttgacc
gggatcaagaagcatttctgtagaaagcatggtgagaagaagtggaaatgtgacaaatgt
tcaaagaaatatgctgttcaatcagattgcaaggctcattctaagacctgtggcaccaaa
gaatacagatgtgactgtggcactctcttttctaggagggatagtttcataactcataga
gcattttgtgaagcattggccgaagagactgcaagggaagtagtaataccacaaaaccag
aatcatcaaccgaaccctcttatgattcaacaatcttcttcttcttcttctcatcatcat
caagcacaaccaaccgtgaacatctcgtcctgttcttcctcttcccacaacatcatcaac
agccttcacttcgagaccaaccataatggtactaataatagcaacactaacagcaaccac
ctccatacttttccaatgaagatagagcaacaacaaagcaatgatcatatcatcagttac
caccagcacatcatccctccttggctcacatctccaaaccctaaccctagtaatggtgga
ggaggtttgttctctcttgcagcttctccggctatgtcagccaccgcattgctccagaaa
gcagctcaaatgggttccacaaagtcacccccattaccaccaaacacagactccgagagg
ccagctcatcataataataacctcaccacaaaaatggcgtcaatgatgacatcaccatct
ggcttcatcagctccaacaacagcaacaaccaagttctctttcaagactacaatgcctct
gagtttgatcatcacggtggagaagaagccttcgacgatacattcggcgggttcttgagg
acaaacgttgatactacaaccacgtcaggatcagacaagaataaaagcggtggcggagga
ggagagggtttgacgagagatttcttggggctaagaccgttaatgtctcataatgagatt
ctaagttttgccggtctagggaactgcatcaatggctctgcttccgatcagcttcatcca
aagccttggcagggcacgcaagtgggatccaacaaaagatag
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