Raphanus sativus (radish): 108813275
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Entry
108813275 CDS
T06014
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108813275
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108813275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
108813275
NCBI-ProteinID:
XP_018441297
UniProt:
A0A6J0K029
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Position
1:6222419..6224986
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AA seq
473 aa
AA seq
DB search
MASSTVRNVHGKRSSFQSEFTGNGASKRRNLQDETDRNVIGSEDTVYRYLCPVKKTGSII
GKGGEIAKQIRSETKANMRINEALPGCEERVVTIYSTSDELNHFGDDGEIVCPALDALFK
VHDMVVADSNDDDDDDDDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRTETNAQIRV
IKDNLPPCALTLSHDELLQIIGEPLIVREALYQVASLLHDNPSRFQHSLLSSPSTLMHQP
LTSSHRNYVRDLADATEFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVTTSETED
DDSIIFISSKEFYEDQSPTVSAAILLQERCSEKVGKDTNDSTISTRLLVSSSHIGCLIGK
GGAVISEMRSVTRANIRILQKENVPKIAREDEEMVQITGNPDAAMKALTQVVLRLRANAF
DMNHGLVLLPTSFPYVSQVSESSNKSKYAKRDGSRDQDYSRLNSNSKRRNHVS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctagtagtactgtgaggaacgtgcatggtaagagatctagtttccaatctgagttt
actggaaacggagctagtaagagaagaaaccttcaggatgagacagatcgcaatgtcatt
ggttctgaagacaccgtgtaccgttacttgtgccctgtgaagaaaacagggagcatcatc
ggcaaggggggtgagatagcgaagcagataaggtccgagactaaagcaaacatgaggatc
aacgaagctttgccaggttgtgaggagcgtgttgttaccatatactccactagtgatgag
ttgaaccactttggagacgatggagagattgtttgccctgccttggatgctcttttcaag
gttcacgacatggttgtagcggacagtaacgatgatgatgatgatgatgatgatcttggc
gagaaacaaacggttactgtgaggatgcttgtgccttcagaccagataggttgtgttatc
gggaaaggcggacaagtgattcagaatcttcgtaccgagaccaatgctcagattcgtgtc
attaaagataatctacctccctgtgctttgactttgagccatgatgagcttcttcaaata
attggagagcctttgattgtaagagaggctctttatcaagttgcttcactgcttcatgat
aatccatcacggtttcagcactctcttctgtcttctccgagtacattaatgcatcagcca
ttaacgagctctcacagaaactacgtgagagatctagccgacgctacggagttttgtgtt
tgtttcatctgtccagctgaaaacgtcggaggagtgataggaaaaggaggcggtttcatc
aatcagatcaggcaagaaactggtgcaacgattagagtcactacctcggaaactgaagac
gatgatagcatcattttcatatcatcaaaagagttctacgaagaccaatcaccaacggtg
agtgcagccatacttttacaagagcgatgcagtgagaaagttggtaaagatacaaatgat
tcaacaatctccactcgtttacttgtgtcgagttcccatatcgggtgcctcattggaaaa
ggtggtgctgttatatccgagatgaggagtgtaacgcgagctaatatccgtattcttcaa
aaggaaaatgtaccaaaaattgctcgtgaagatgaggagatggttcagattacaggaaat
cctgatgcagctatgaaagctcttacccaagtggtcttgcggttaagagctaacgctttc
gacatgaatcatggacttgtcttgctaccaacatcgtttccatatgtctctcaagtatcc
gaaagttcaaacaaatctaaatacgcaaagcgggatggttccagagatcaagactatagt
agactgaattcgaattccaagagaagaaaccatgtttcttaa
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