Raphanus sativus (radish): 108813361
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Entry
108813361 CDS
T06014
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108813361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108813361
Spliceosome [BR:
rsz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108813361
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
108813361
NCBI-ProteinID:
XP_018441400
UniProt:
A0A6J0K090
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All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATLEDSFLADLDELSDNEAELEESDGDDAKKDDEDIDMDMADLETLNYDDLDSVSKLQK
SQRYLDIMQKVKEALGKESDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIAIVHNFIRD
KYRLKFQELESLVNHPIDYARVVKKIGNETDLTLVNLEGLLPSAIIMVVSVTALTTKGSP
LPEDVLEKTLEACDRALDLDSARKKVLDFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIFQSTPPALKSRAGRILAAK
STLAARVDATRGDPSGTNGKALREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRR
LRKMKERYAVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRISSVPSKLKI
NPTIAKKLKERNYASGATTSGLTSSLAFTPVQGIELCNPQQALGLGSGTQSTYFSESGTF
SKLKK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgaagactctttcctcgcagacctcgacgagttatctgacaatgaagca
gaactggaggagtctgatggtgatgatgcaaaaaaggatgatgaagatatcgacatggac
atggctgacttagaaacccttaactacgatgatctcgattccgtttctaagctccagaaa
tctcagagatatcttgacattatgcagaaagtgaaagaggctcttggaaaggaatctgat
ggagcggagaaaggaactgtactagaagatgatcctgaatacaagctaatcgtggattgc
aaccagctctcagtcgacattgagaacgagattgccatagtccacaacttcatccgtgac
aagtacagactcaagtttcaagagcttgagtctctggtgaaccaccctattgattacgcc
cgcgttgtcaagaaaataggcaacgagacggatctaacactcgtcaatcttgaaggcctt
cttccctctgctatcatcatggttgtttctgtcactgccttgaccactaaagggagccca
ctcccagaggatgtcctggagaagactctagaggcttgtgatcgagctttagatcttgat
tccgctaggaagaaggttcttgactttgttgaaagcaagatggggtctatcgcgccgaat
ctctccgccattgttgggagtgctgttgcagccaagctgatggggaccgctggaggtttg
tcagcgcttgctaaaatgcctgcctgtaatgttcaggttcttggccacaagaggaagaac
cttgccgggttctctagtgcaacgtcgcagtcacgtgtgggttatctggagcagacggag
attttccaaagcacgcctccggcgcttaagagtcgcgccggcaggatcttggcggcaaag
tcgactttggcagctagagttgatgctaccagaggagacccatcgggaacaaatgggaaa
gctttgagggaagagatccgtaagaagattgagaagtggcaagaacctcctccggcaagg
cagcctaagccacttcctgttcctgactctgagcctaaaaaaagaagaggtggtcgccgt
ctaaggaaaatgaaagaaaggtatgcagtgacagacatgaggaagcttgccaacaggatg
gcgtttggtacacccgaagagagctctcttggtgatggattaggtgaaggatatggaatg
cttggccaggctgggagcaacaggctgcgtatatccagtgttcccagcaagctgaagatt
aatcccaccattgccaaaaagctgaaagaaagaaactatgcgagtggtgccactacctct
ggattgacttcgagtctggcttttactcctgtgcagggaatagagctgtgtaatcctcaa
caggctttaggattaggcagtgggactcaaagcacttacttttcagagtcagggaccttc
tctaagctcaagaaataa
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