Raphanus sativus (radish): 108813377
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Entry
108813377 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108813377
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108813377
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
108813377
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108813377
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
DUF7082
Motif
Other DBs
NCBI-GeneID:
108813377
NCBI-ProteinID:
XP_018441419
UniProt:
A0A6J0K323
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Position
6:43597041..43601193
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AA seq
806 aa
AA seq
DB search
MGRGRHRGRSQRKHFKESRENVWKRPKTDPTVDASDNSAADRPNWQPIPTDNPNFEEYYK
EQGIVKAEEWDVFMEILRKPLPAAFRVNSNSQFCDDIISILENDFVKSLQAEAIEGGELE
AIKPLPWYPKNLAWHSNFSRKEIRKHKTLERFHEFLKLENEVGNITRQEAVSMVPPLFLD
VHPDHFVLDMCAAPGSKTFQLLEIIHGASEPGTLPNGMVVANDVDFQRSNLLIHQTKRMC
TSNLIVTNHEGQQFPGCRLNKSRASEKGLSEDMPINQLSFDRVLCDVPCSGDGTLRKAPD
IWRKWNSGMGNGLHSLQVILAMRGLSLLKVGGKMIYSTCSMNPVEDEAVVAEILRRCGDS
VELVDVSDKLPELIRRPGLKTWKVRDKGAWFTSYKDVPQNRRGGVLVSMFPSGKNLTDST
QNNENGGGNASEDGCKETNKPLVDSFPDEQVVEVSDLPLERCMRIIPHDQNTGAFFIAVL
HKVSPLPEFQEKPNPRKHSSTKTAESTDKSPAEEAVVTADAEPVESPVEKVIEADANNEK
DESLVEPEKKNTEGETITEEKEANSSIHAGDKRKVPMQGKWKSFDPVVFLKDETLIDTIK
EFYGIRDESFPLYGHLVTRNTDTSSVKRIYYVSKSVKEVLQLNFAVGQQLKIASVGLKMF
ERQTAKEGGSKPCSFRISSEGLPVILPYITKQVLYSPMADFKHLLEYKSIKFPDFVNKQL
GQKAIDLVLGCCVVILSDGEEAVKVDASTIAISCWRGKNSLGVMVTSADCQELLERLAER
TTPKSEGGSVNESNGDSGGPGAMETV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaagacacagaggtcgttctcagcggaaacatttcaaagaaagcagagag
aatgtctggaaacgccccaagaccgatcctaccgtcgacgcttccgacaactccgctgct
gacagacctaactggcaacctattccgacagataaccctaacttcgaggagtattacaag
gaacaagggatagtgaaagcagaagagtgggatgtgttcatggagattcttcgtaagcct
ttgcctgctgcctttagggttaactccaatagccagttttgcgatgatattatatcaata
ttggagaatgacttcgttaaatctcttcaggctgaggccatagaaggtggtgaattggag
gctattaagccactgccttggtacccgaagaacctcgcttggcattctaatttttctagg
aaggagattaggaaacataagacacttgagaggtttcatgaatttctgaaattagaaaac
gaagttggaaacattaccaggcaggaagctgttagcatggtacctcctctattcctagac
gtacatccagatcattttgtacttgacatgtgtgctgcacctggttccaaaacatttcaa
ctgctcgagattatacatggagcatcagaaccagggactctacctaatggaatggtggtg
gctaacgatgttgatttccaaagatctaaccttcttatccaccaaacaaagagaatgtgc
acatcaaacttgatagtgactaaccacgaagggcaacagtttcccggttgccgcttgaac
aagtcccgagcttccgagaaaggactaagtgaagatatgcccattaatcaactttccttt
gaccgtgttctctgtgatgttccgtgcagtggtgatggtacactacgcaaagctccagac
atctggcggaaatggaactctggaatgggcaatggacttcatagcctacaggttattctc
gctatgaggggtttgtcacttttgaaagttggcgggaaaatgatatactcaacctgctca
atgaacccggttgaggatgaagccgttgttgctgagattctaaggaggtgtggagactct
gttgaacttgtagatgtttccgacaagcttcctgaacttatacgaagaccaggccttaag
acgtggaaggtgcgtgataaaggtgcgtggtttacttcttacaaagacgttcctcaaaac
agaagaggcggagttcttgtgagcatgtttccttctgggaaaaacctaactgactcaact
cagaataatgagaatggtggtggaaacgccagtgaagatggatgcaaagaaaccaataaa
cctttagtggattcatttcctgatgaacaagttgttgaagtctctgatcttccacttgag
cgatgcatgaggataatacctcatgatcaaaacactggagcctttttcatcgctgtcctt
cacaaagtttcacccctgccagaatttcaggagaaaccaaatccgaggaaacactcatct
actaaaactgctgagtcgactgacaagtccccagctgaagaagcggttgtcactgctgat
gctgaaccagtagagagtccagttgaaaaagttatagaagcagatgcaaacaatgagaaa
gatgagagcttggtggagcctgagaagaaaaacacagagggagaaaccatcacagaagag
aaagaagccaacagttcgattcacgcaggagacaagagaaaagtaccaatgcaagggaag
tggaaaagctttgacccagttgtcttcctgaaagacgagacgttgatcgataccatcaag
gagttttacggtatcagagatgaatcattcccattgtatggtcacctcgtgacaagaaac
actgacacaagcagcgtgaagaggatttactacgtttcgaaatcggtcaaggaggttctt
cagctgaatttcgcagtcggacagcagcttaagattgcttccgttggcctcaagatgttt
gagagacaaacggcaaaagaaggtggaagcaagccttgctcattccgtatatcatcagag
gggctaccagtgatccttccatacatcaccaaacaagttctttacagtccaatggcagac
ttcaaacatcttctggagtacaagtcaatcaagtttccagattttgtcaataaacagttg
ggacagaaagcaattgaccttgtccttggatgctgcgtggtgattctcagcgacggtgaa
gaggcagtgaaagtggatgcatcaacaatagctatcagttgctggagagggaagaacagt
ttgggtgttatggtaacttctgctgattgccaggagttgctagagagacttgctgagaga
acaacacccaaaagcgaaggtggttcggttaatgagagcaatggcgattcgggtggtcct
ggagctatggagacagtttaa
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