Raphanus sativus (radish): 108813405
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Entry
108813405 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108813405
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03060
Protein export
rsz04141
Protein processing in endoplasmic reticulum
rsz04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
108813405
04141 Protein processing in endoplasmic reticulum
108813405
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108813405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108813405
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rsz02044
]
108813405
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
108813405
Secretion system [BR:
rsz02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
108813405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
108813405
NCBI-ProteinID:
XP_018441447
UniProt:
A0A6J0MZJ2
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Position
6:48404950..48407546
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AA seq
475 aa
AA seq
DB search
MGGGFRVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
LLGILIAIGEAVAYVLSGMYGPVGQLGVGNAILIILQLFFAGIIVICLDELLQKGYGLGS
GISLFIATNICESIIWKAFSPTTINTGRGAEFEGAVIALFHMLITKSNKVAALRQAFYRQ
NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
VSNLYFISQLLYRKFSGNFFVNLLGQWKESEYSGQSIPVSGLAYLITAPASFSDMAAHPF
HALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPT
AAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggatttagagttttgcatttggtgaggccgttcttggcttttcttccggag
gtccagagtgctgacaggaaggtgcctttcagagagaaggttatctacactgtcatctct
ctcttcatcttccttgtctgcagccagcttcctctctacggtatccactccaccaccggc
gccgatcctttctactggatgcgtgtcattctcgcctccaaccgtggcaccgtcatggag
cttggtatcactcccatcgtcacctctggcctcgtgatgcagctcttggctggttccaag
attatcgaggttgacaacaatgtccgcgaggatcgtgccctcttgaacggtgctcagaag
cttcttggtattctgatcgccatcggtgaggctgttgcgtatgttctctctggaatgtat
ggccccgttggtcagctcggtgttggcaatgccattctcatcatcctccagcttttcttt
gccggaatcattgttatctgccttgacgagcttcttcagaagggatacggtctcggctca
ggaatctcccttttcattgccaccaacatctgtgagagcattatctggaaggcgttcagc
ccaactacaatcaacactggacgtggagctgagtttgaaggtgctgttatcgcgctgttc
cacatgctgataactaagtccaacaaggttgctgctctccgccaagcgttctaccggcag
aaccttccgaacgtcaccaacttgcttgccacggtattgatcttcctgattgtcatctac
ttccaagggttccgtgtggttttgcctgtgagatcaaagaatgcccgtgggcaacagggc
tcttacccgatcaagctgttctacacctctaacatgcccatcattctccaatccgctctc
gtctcaaatctttacttcatctctcagcttctctacaggaagttcagtggaaatttcttt
gtaaaccttttgggacaatggaaagaatctgagtacagtgggcagtctattccagttagt
ggtctggcttacctcatcacagctccagcaagcttctcagacatggcagcacacccattc
catgcactgttctacatcgtcttcatgctcactgcttgtgctcttttctcaaagacatgg
attgaggtctccggatcttctgctagggacgtggccaagcagctcaaggaacaacaaatg
gtgatgccgggacacagagagtcgaacttacagaaggagctgaacaggtatatcccaaca
gcagcagctttcggtggagtttgtatcggtgcactgaccgttcttgctgatttcatggga
gccattgggtccgggactggaattctcttggcggtgacaatcatatatcagtatttcgag
acattcgagaaggagaaagcaagtgaacttggcttcttcgggttctaa
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