Raphanus sativus (radish): 108813415
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Entry
108813415 CDS
T06014
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108813415
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108813415
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108813415
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
IBR_1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108813415
NCBI-ProteinID:
XP_018441459
UniProt:
A0A6J0K367
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Position
6:27318150..27321170
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AA seq
575 aa
AA seq
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MESGEEDGYYYTSDQESLDGLDHDQSNLQPLSSTVNSAKVITKESLLAAQREDLRRVMEL
LSLKEHHARTLLIHHRWDVEKLFAVLVEKGKDFLFSRAGLTLVQDHPTFSPSSMMSCDIC
VDDVAGHLMTRMDCGHCFCNNCWARHFAVMINEGKSKRIRCMAYKCNAICDEDVVRSLVS
KTQPDLAHKFDRFLIESYVEDNKMVKWCPSTPHCGNAIRVEDDELCEVECSCGFQFCFSC
SYQAHSPCSCSMWELWRKKCHDESETVNWITVHTKPCPKCYKPVEKNGGCNLVTCLCGQS
FCWLCGEATGRDHTWSSISGHSCGRYQEDKEKQLERAKRDLYRYMHYHNRYKAHIDSSKL
EDRLSDTILEKVSILERRQLQLKDFSWVTNGLHRLFRSRRVLSYSYPFAFYMFGEELFKD
EMSAEEREIKQNLFEDQQQQLEANVEKLSQFLEEPFDQFADDKVVQIRIQVINLSVAVDT
LCKKMYECIENDLLGSLQLGIHNIAPYRSNGIERASNFISSREAAGEKRQPPNSGWNSED
TSCSSRKRPRREGVYRNNQTTLLDLNLPADVIERK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggcgaggaggacggttactattacacctccgatcaagagtctctggacggc
cttgatcatgatcaatccaatctccaacctctctcctccacagtaaattccgccaaggtc
attacaaaggaatcgcttttggctgcacagagggaggatctgcggagagtgatggagttg
ttatcgctaaaggagcaccatgctcggactcttcttatccatcaccgatgggacgttgag
aaactgtttgctgttcttgttgagaaaggcaaagatttcttgttttcccgtgccggtctt
acacttgttcaagatcatcccaccttttctccttcttccatgatgagttgtgatatctgc
gtagacgacgtagcaggtcatctcatgacaagaatggattgtggccactgcttttgcaat
aactgttgggctaggcattttgctgtaatgataaatgaaggtaagagcaaaaggattaga
tgcatggcttacaaatgcaacgctatttgcgatgaagatgttgtccggagtcttgttagt
aagacccaaccagatttagcacacaagtttgatcgttttcttatcgagtcatacgtcgaa
gacaacaaaatggtgaagtggtgtccgagcactccgcattgtgggaatgcaatacgtgtt
gaggacgacgagctctgtgaagttgaatgctcttgtgggtttcagttctgtttcagctgt
tcctatcaagcccactccccttgctcttgttccatgtgggagctttggaggaaaaaatgc
catgatgagtctgagactgttaattggattactgttcacaccaagccgtgtcccaaatgt
tacaaacccgttgaaaagaatggtggatgcaacctcgtgacttgtctctgcggacaatct
ttttgttggttgtgtggtgaagctacgggaagggatcacacttggtctagtatctcgggt
catagttgtggtcggtaccaagaagacaaagagaaacagctggagagagcgaaaagggat
ctttaccggtatatgcattaccataaccgttacaaggcacatatcgattcctccaagcta
gaggataggcttagtgatactatcctcgaaaaggtgtcaattttagagagaaggcagtta
caacttaaagacttcagctgggtaaccaacgggctccatcggttgtttagatcaaggcga
gttctctcgtattcataccctttcgcgttttacatgtttggagaagaactgttcaaagac
gagatgagtgctgaagagagagaaataaaacaaaacctgtttgaggatcagcagcagcag
cttgaagccaacgttgagaaactttcccagttcttggaagagccctttgatcaattcgct
gatgataaagtcgtgcagataaggattcaagtcataaatttgtctgttgcagtggatact
ctctgcaaaaaaatgtatgagtgcattgagaatgacttgctgggttctctgcaacttggc
atccacaacattgctccatacagatcaaatggaatagaacgagcatcgaactttattagt
tcccgtgaagctgccggtgagaaacgccaacctccgaattcaggatggaactcagaagac
acaagttgctcttcgaggaaacgtcccagaagagaaggagtttacagaaataatcaaacc
actttactggatttaaacttgccagcggatgtcattgagcggaaatga
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