Raphanus sativus (radish): 108813507
Help
Entry
108813507 CDS
T06014
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108813507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108813507
03036 Chromosome and associated proteins [BR:
rsz03036
]
108813507
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108813507
Coactivators
SAGA/TFTC/STAGA complex
108813507
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108813507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
108813507
NCBI-ProteinID:
XP_018441584
UniProt:
A0A6J0K3J5
LinkDB
All DBs
Position
6:22099843..22104350
Genome browser
AA seq
808 aa
AA seq
DB search
MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEGGGSTSLPTNPPPGNDTHSPNQHFT
TTWKNGGIGGDANMNLLTQQHSLESTQIKDQQGSVIDSQQQQHDSKRADESQLQHNPPQD
LHRPAQLWEKNPSQISEKNPNEPERPHNQESESQFPKLQKMSSNQQAQARGVEQPVNPLN
RNPKQVPFAALLPTLLAQLDKDRALQLRTLYSRLKKNEIPKEGFTRHMKDIVGDQMLRLA
VSKLQQVGYNQGKIGIQAPSTGIDNQKSPSDPRGIVHLNQLPSSTGSSVPVQGLIKHQPH
QMQLPPSSFPMYTSSGNFHSFPGSNTNVSGSPLRPHLHDPHMRHVAHNQTMGSSGLGGPQ
QSTTNMMTMPKFERPTSVNDPSRVQGGATPHFQNNSSLPLNSAPGQGSSMSHVKQESVDQ
SFEQKNAASGTSKEDLEKDSSRNMAQTSSVSPSMTTQLDASTAMNSRGQLGTSQAGVNTR
MPPKKPFVGQKKPLETLGSSSSPPSKKQKVVQNSMDQSIEQLNDVTAVSGVNLREEEEQL
FSGGKEDGRVSEASRRVVHEEEERLILQKIPLQKKLAEIMAKVGLKQISNDVERCLSLCV
EERMRGLLSHIIRLSKQRVDTEKSRHRTVITSDVRQQINEMNQKVKEEWEKKQAEAEKLK
KPSEGEEGDGGVDSEKEKEDNRSKGLKGNKEDDDKMRTTAANVAARAAVGGDDTFLKWQL
MAEARQKSVSESGKDGTQKATSTGGRNSKDKQDGGRRFTGAGGRRLGKNQGSSLQPKVVR
TISVKDVVTVLEREPQMSKSILMYRLLQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcaattttcaagctcctcgaagaagacgaggatgaatcgatgcattcggga
gctgatgtggacgcgttccaggccgctctaaatcgagacattgaaggaggaggttctact
tccctccctacgaaccctcctcctggaaacgacacccattctcccaaccaacacttcaca
acgacatggaagaatggtggtataggaggagatgccaatatgaatctcctgacgcagcag
cacagcctcgaaagcactcagattaaggatcaacaaggatcggttatagacagtcaacaa
caacaacatgattcaaaacgtgcagatgaatctcagttacagcacaacccgcctcaagac
cttcatcgaccagctcagctttgggagaagaatccttcgcagatttctgaaaagaatcct
aatgaaccagaaagaccgcataatcaagagagcgaatctcagtttccgaaactgcaaaag
atgagtagtaatcaacaggctcaggctcgtggagtggagcagcctgttaatcctctgaac
cgtaaccctaagcaagtaccgtttgctgctttgcttcctaccttattggctcaactcgat
aaagacagagcgctgcagctccgtaccctatattctagacttaagaaaaatgaaatcccc
aaagaggggttcacacgacatatgaaggatattgtaggcgatcagatgcttaggttagca
gttagtaaactacagcaggtgggttataaccaggggaaaataggaattcaagctccttct
actggtattgataatcaaaaatctccgtctgaccctcgtggaatcgtccaccttaaccaa
ctaccttcgtcaacaggcagttcagttcctgtgcaggggcttatcaaacatcagccgcac
cagatgcagcttccaccaagctcttttcccatgtataccagctccggtaatttccactca
ttcccgggttcaaacaccaatgtttctggttccccattgagaccacaccttcatgatccc
catatgagacatgtggcacataaccagaccatgggatcatctggtctcggaggaccgcaa
cagtctacaacaaacatgatgactatgcccaagtttgagaggccaacttctgtcaatgat
cctagtagggttcaaggtggcgctacaccgcacttccagaacaactcgtcattgcctcta
aactctgcacctggtcaaggatcatcaatgtctcatgtgaagcaggaatcagttgatcaa
agttttgaacagaagaatgcagcctcagggacttcgaaggaggatttagagaaggactcc
tctagaaacatggcgcagacaagctctgtttctccttccatgacaactcaactggatgct
agcacagcgatgaattctcgtggtcaattgggtacgtctcaagcaggagttaatactagg
atgccacccaaaaagcctttcgttggtcagaagaaacctcttgagacattaggttcttca
tcgtcaccaccaagcaagaagcaaaaagtggtacagaattctatggatcaaagtattgaa
cagctcaatgatgtcactgcagtcagtggtgttaatctcagggaagaggaagaacaattg
ttctctgggggcaaggaggatggtcgtgtttctgaagcatctcggagagttgtgcacgaa
gaggaagaaagactaattttgcagaaaattcctctgcagaaaaagctggcggaaattatg
gcgaaagtcggtttaaagcagataagcaatgatgttgaacggtgcttgtctttgtgtgtg
gaggaaaggatgcgaggactgttatctcatataattcggttgtcaaagcagcgggttgat
actgagaaatctagacaccggactgttatcacctcagatgttcggcagcaaatcaacgaa
atgaatcagaaagtgaaagaggaatgggagaagaaacaggctgaagcagaaaaacttaag
aaaccgagtgagggtgaagaaggtgatggtggagttgatagtgagaaggagaaagaagat
aaccgttcgaagggtttgaagggaaacaaagaggatgatgacaaaatgagaacgacagca
gcaaacgttgctgctcgtgctgctgtgggaggagatgatacgtttttaaaatggcagtta
atggcagaagcacgtcagaaatctgtatctgaatctggtaaagatgggactcagaaagct
acttcaactggaggaagaaactccaaggacaagcaagatggtgggcgacggtttactgga
gctggtggtcgaagattagggaagaaccaaggttcgtcgcttcaaccaaaagtggtgagg
acaatctcggtgaaggacgtggttactgtcttggaaagagagcctcagatgtctaaatct
attctaatgtatcggttacttcaatag
DBGET
integrated database retrieval system
