KEGG   Raphanus sativus (radish): 108813521
Entry
108813521         CDS       T06014                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B'' isoform X1
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108813521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108813521
Spliceosome [BR:rsz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108813521
 Complex B
    108813521
 Complex C
   U2 SnRNP specific factors
    108813521
SSDB
Motif
Pfam: RRM_1 RRM_5 DUF4523 RRM_YTH1
Other DBs
NCBI-GeneID: 108813521
NCBI-ProteinID: XP_018441602
UniProt: A0A6J0K0Y2
LinkDB
Position
6:complement(46858003..46859725)
AA seq 241 aa
MFTADIPPNQSIYIKNLNERIKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVAFS
DVTAATNAVRQMQNFPFYDKPMVCLSQVFLLPLSGRIQFAKEKSDCIAKEEGTFVPNDKK
RKKHEKAERKREETQRPNTANGPTPQNGAPAPSSYKPSGQEAMPPNNILFIQNLPHDTTT
AMLEFLFRQYPGFKEIRMVAAKPGIAFAEFEDDVKSSMAMRGLQDFKITPQYPMLISFAK
K
NT seq 726 nt   +upstreamnt  +downstreamnt
atgttcacggcggatataccaccgaatcagtcaatctacatcaaaaacctcaatgagaga
atcaaaaaagaagaattgaagagatctctttactgtttgttctcacagtttgggaggata
cttgatgtggttgctttgaagactcctaagctacgtggtcaagcttgggtcgcctttagt
gacgtcactgctgctactaatgccgttcgccagatgcagaacttccctttctatgataag
cctatggtctgtctgtctcaagtttttttattgcctctttctggtcgcatacagttcgca
aaagaaaagtcagattgtattgctaaagaggaaggaactttcgttcccaatgataagaag
aggaagaaacatgagaaagctgaaagaaagcgtgaagaaacccaacgaccaaacacagct
aatggcccaactccacagaacggagcccctgcgccatcatcgtacaagcctagcggacaa
gaagcgatgccaccaaacaacatactcttcattcagaatcttccgcacgatacaacaacc
gctatgctcgagtttctcttccgtcagtatcctggattcaaggagataagaatggtcgcc
gctaaaccagggattgcatttgcggagttcgaagacgatgttaaatcttccatggcaatg
cgtggtcttcaggacttcaaaatcactccccagtatcccatgctcatctcttttgccaag
aaatga

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