Raphanus sativus (radish): 108813553
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Entry
108813553 CDS
T06014
Name
(RefSeq) cell division cycle protein 27 homolog B
KO
K03350
anaphase-promoting complex subunit 3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108813553
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108813553
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108813553
03036 Chromosome and associated proteins [BR:
rsz03036
]
108813553
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108813553
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
108813553
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
108813553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
ANAPC3
TPR_12
TPR_11
TPR_17
TPR_19
TPR_16
TPR_CcmH_CycH
TPR-S
ANAPC8
TPR_9
DUF7017
TPR_10
TPR_15
Motif
Other DBs
NCBI-GeneID:
108813553
NCBI-ProteinID:
XP_018441638
UniProt:
A0A6J0K1U9
LinkDB
All DBs
Position
6:23372620..23377536
Genome browser
AA seq
743 aa
AA seq
DB search
MEAMLVDCVRNSLSHFVYKNAIFMCERLCAEFPSEVNLQLLATSYLQNNQAYSAYHLLKG
TQMAQSRYLFALSCYQMDLLNEAESSLCPVNEPGAEIPNGAAGHYLLGLIYKYTDRRKNA
AQQFKQALTLDPLLWAAYEELCILGAAEEATAVFGETAALSIQKQYMQQMQTSIGLNTYN
EERNTTSAKTTSSEDYSPRQPKHTQGHGLKDISGNFHSHGLNGGVSNMTFYNTPSPVAAQ
LSGMAPPPLFRNFQPAVSNQNSLTTDNSPKSTVNSTIQAPAPRRKFVDEGKLRKISGRLF
SDSGPRRSSRLSADLGANTNASVATVSGNGNNTSKYLGSSKLSSLGLRSVTLRKGNSWAN
ENMDEGVRSESFDDSRPNTASTTASMASSDAKSCDQEDEIMSQKITIGVSEILSLLRTLG
EGCRLSYMYKCQEALDTYMKLPHKHYNTGWVLSQVGKAYFELIDYLEAEKAFRLARQASP
YSLEGMDIYSTVLYHLKEDMKLSYLAQELISTDRLAPQSWCAMGNCYSLQKDHETALKNF
LRAVQLNPRFAYAHTLCGHEYATLEDFENGMKSYQNALRVDTRHYNAWYGLGMIYLRQEK
LEFSEHHFRMAFLINPSSSVIMSYLGTALHALKRSEEALEIMEHAILADRKNPLPMYQKA
NILVCLERLDEALEVLEELKEYAPSESSVYALMGRIYKRRNMHDKAMLHFGLALDMKPPA
TDVAAIKAAMEKLHVPDEIDESP
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggaagctatgctagtggactgtgtacgcaacagcctcagtcattttgtgtacaagaat
gccattttcatgtgcgagcgtctctgcgccgagtttccctccgaggttaatctgcagcta
ttagccaccagttaccttcagaataatcaagcttacagtgcctatcatctgctcaaggga
acacaaatggctcagtctcggtacttgttcgcgttatcttgctaccagatggaccttctt
aatgaagctgaatcttcactctgccctgttaatgaacctggtgcggagatcccaaacggt
gcagcaggtcattaccttcttggacttatttacaagtatactgatagaaggaagaacgcc
gctcaacaatttaagcaggctttgacgctggatcctctactttgggctgcatatgaggaa
ttatgcatactaggtgctgctgaggaagcaactgctgtttttggtgaaactgctgctctc
tccatccaaaagcagtacatgcaacaaatgcaaacttcgatcggcttaaacacgtacaat
gaggaacgtaatacgacttcagctaaaaccacgagttctgaagattacagtccaaggcag
cccaagcacacacaaggccacggccttaaagatatctctggaaatttccattctcacggt
cttaatggaggtgtttcaaacatgacattctataataccccttcgccagtggctgcacag
ctatccggtatggctccaccaccacttttccgaaattttcagccggctgtctcaaatcaa
aattcccttactactgacaattccccaaagtccaccgttaactctactattcaagcacct
gcacccagaagaaaatttgtagacgaaggaaagctgcgtaagatttcgggcaggctgttt
tctgattctggtccacgaaggagttctagactctctgctgatttaggtgcaaacactaat
gcaagtgttgcaacagtaagcggaaatgggaacaacacttccaagtatttgggaagttct
aaactgagttctttgggacttcgctctgttacacttcggaaggggaattcttgggcaaac
gaaaacatggatgaaggggttcgtagcgaatcttttgatgattcaaggcctaatactgcc
tcaacgactgcttctatggcttccagtgatgctaaatcctgtgatcaagaagatgaaata
atgtcgcaaaaaatcacaattggtgtttcagaaatattaagcctcctaaggacactcggg
gaagggtgtagactgtcgtacatgtacaagtgtcaggaggcactggatacgtatatgaaa
cttccacataagcattataatacaggatgggttctttcccaggtggggaaagcatacttt
gaattaatagactatttagaagctgaaaaagcattccgtcttgcccgccaggcttctcct
tatagcttagaaggaatggatatttactctacggtcctctaccatttgaaggaagatatg
aagcttagttacttggctcaggaactaatatcaacagatcgcttagctccgcaatcttgg
tgtgctatgggaaactgttatagtttgcaaaaagaccatgagactgcactgaagaacttc
ctacgagctgtacaactgaatccaagatttgcatatgcacatactttatgtggccacgaa
tacgcaactctagaagattttgagaacggaatgaaaagttaccaaaacgcacttcgtgtg
gacacaagacactataacgcatggtatgggcttgggatgatctacctacgtcaagagaag
ttagagttctcagagcatcacttcagaatggccttcttaataaacccgagttcctctgtt
ataatgtcttatttggggacagctctgcatgccttaaagagaagcgaggaagcgttagag
ataatggagcatgctatattagcagacaggaagaatcctcttccaatgtaccagaaagct
aacatacttgtctgcttagaaagattagatgaagcgctagaagttctggaggagcttaaa
gagtatgcgccttcagagagcagcgtctacgctttaatgggcaggatctataagcggcga
aacatgcacgataaagccatgcttcatttcggtctcgctttggatatgaaaccgcctgca
actgatgttgctgcaataaaggctgcaatggagaaactgcatgttccggatgagattgat
gagagcccatag
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