KEGG   Raphanus sativus (radish): 108813566
Entry
108813566         CDS       T06014                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    108813566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rsz03036]
    108813566
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     108813566
    NSL complex
     108813566
   HMT complexes
    COMPASS/SET1 complex
     108813566
    COMPASS/SET1 complex (yeast)
     108813566
    MLL-HCF complex
     108813566
    MLL3/MLL4 complex
     108813566
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     108813566
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF4 eIF2A Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_WDR19_1st RMC1_N Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_DCAF12 WD40_like Ge1_WD40 WD_LRWD1 Big_7 DUF5888 WDR54 Beta-prop_NOL10_N ZP1_ZP4_Ig-like
Other DBs
NCBI-GeneID: 108813566
NCBI-ProteinID: XP_018441653
UniProt: A0A6J0K1W4
LinkDB
Position
6:complement(39962448..39963918)
AA seq 320 aa
MADEEVPSFTPYTHSQTLTSHDHAVSSVKFSPDGRLLASSSSDRTIRTYSININPDDENS
VPIAKPLQVLTGHQNGVSDVAFSPDARLIVSASDDKTLKLWDVETGSSIKTLHGHTSHAF
CVGFNPQSSTIASGSFDETVRIWDVKTGKCLKILPAHSDPVTAVDFNRDGSLVVSSSYDG
LCRVWDSGTGHCLKTLLMDDENHPVSFVRFSPNGKFVLIGTLDNTLRLWNVSSGKYVKTY
TGHVTSQYSVSSAFSITDGRKIVGGSEDKCVYMWELNSRKLLQKLEGHTEPVMTVACHPT
ENLIASGSLDKSIRLWTPKK
NT seq 963 nt   +upstreamnt  +downstreamnt
atggctgacgaagaagttccatcattcaccccttacacccactcccaaaccctaacctcc
cacgaccacgccgtctcctcagtcaaattctcccccgacggccgcctcctcgcctcatca
tcctccgacagaacaatccgcacttactccatcaacatcaaccccgacgacgaaaactcc
gtccccatcgccaaacccctacaagtactcaccggccaccaaaacggcgtctccgacgtc
gccttctccccagacgcgaggctcatcgtctctgcctccgacgacaagaccctgaagctc
tgggacgtcgagaccggctcctcgatcaagaccctccacgggcacaccagccacgccttc
tgcgtcggattcaacccgcagtccagcaccatcgcctccggctcctttgacgagaccgtc
cggatctgggacgtgaagacgggaaagtgcctgaaaatcctccccgcgcactccgacccc
gtcaccgccgtggatttcaaccgcgacgggtcgcttgtcgtttcgagtagctacgatggg
ctgtgtagggtttgggactcggggactgggcattgtctgaagacgctgctgatggacgac
gagaatcatcctgtctcgttcgttagattctctcctaacggcaagttcgtcctcatcggc
accctcgataacaccctcaggttgtggaacgtttcttctggcaaatacgttaaaacgtac
actggccacgtcacctctcagtactcggtttcctctgcgttttccatcactgatgggagg
aagatagtgggtggatcggaggacaagtgtgtgtacatgtgggagctgaactccaggaag
ttgcttcagaaacttgagggacatactgagcctgtcatgaccgtggcttgccacccgact
gagaacttgatcgcatctggctcgctcgacaagtctattagactttggacaccgaagaaa
taa

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