Raphanus sativus (radish): 108813613
Help
Entry
108813613 CDS
T06014
Name
(RefSeq) pyridoxal 5'-phosphate synthase-like subunit PDX1.2
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00750
Vitamin B6 metabolism
rsz01100
Metabolic pathways
rsz01240
Biosynthesis of cofactors
Module
rsz_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
108813613
Enzymes [BR:
rsz01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
108813613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NMO
His_biosynth
ThiI
Motif
Other DBs
NCBI-GeneID:
108813613
NCBI-ProteinID:
XP_018441717
UniProt:
A0A6J0K1B4
LinkDB
All DBs
Position
6:complement(4739922..4741219)
Genome browser
AA seq
308 aa
AA seq
DB search
MADHDQGAVTLYSGAAITDAAAAKKNHPFSVKVGLAQVLRGGAIVEVSSVNQAKIAESAG
ACAVLVSEPVRSPAGVQRMPDPGLVKEIKRAVSVPAMARARVGHFVEAQILESLAVDYID
ESEIVTAADEDNFINKHNFRSPFVCGCRDTGEALRRIREGAAMIRIQGDVNGTGNVAETV
RNVRRVMGDVRVLNNMDDDEVFAFAKKLSAPYDLVAQTKQMGRVPVVQFASGGIATPADA
ALMMQLGCDGVFVGAEVFEGTDPFKRVRSIVQAVQHYNDPHVLAEMSSGLESAMESLSVS
GDRIQGSV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcacgatcaaggcgccgtgactctctacagcggcgcggccatcaccgacgcc
gccgccgccaagaaaaaccaccccttctccgtcaaagtcggcctagctcaagtcctccgc
ggcggcgcaatcgtcgaggtctcctccgtaaaccaagccaagatcgccgaatccgccggc
gcatgcgccgtcctcgtctcggagccggtcagatcccccgccggagtacaacgcatgccg
gatccgggcctcgtcaaagaaatcaaacgcgcggtgtcagtccccgcgatggcacgcgcg
cgcgtcggccatttcgtggaagctcagatcctggagtctctcgccgtcgactacatcgac
gagagcgagatcgtcaccgcggcggacgaggataacttcatcaacaagcataacttccga
tctccgttcgtgtgcgggtgccgagacaccggggaggcgttgaggaggatcagggaaggc
gcggcgatgattcggatccaaggagatgtgaacgggacggggaacgtcgcggagactgtt
aggaacgttaggagagtgatgggtgacgttagggttttgaacaatatggacgacgatgag
gttttcgcgtttgcgaagaagctgtctgcgccgtacgatctcgtggcgcagaccaagcag
atggggagagttccggttgtgcagttcgcgtctggtgggatcgcgactccggctgatgcg
gcgttgatgatgcagttggggtgtgatggggtttttgtgggggctgaggtttttgagggg
acggatccgtttaagagagtgaggagtattgttcaggcggttcagcattataatgatcct
catgtgttggctgagatgagttctggattggagagtgcgatggagagcttaagtgtgagt
ggtgacaggattcaagggagtgtttga
DBGET
integrated database retrieval system
