Raphanus sativus (radish): 108813665
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Entry
108813665 CDS
T06014
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108813665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108813665
03036 Chromosome and associated proteins [BR:
rsz03036
]
108813665
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108813665
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
108813665
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108813665
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108813665
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108813665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
zf-PARP
PARP_reg
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
PTCB-BRCT
BRCT_3
Motif
Other DBs
NCBI-GeneID:
108813665
NCBI-ProteinID:
XP_018441794
UniProt:
A0A6J0K482
LinkDB
All DBs
Position
6:complement(47232045..47237771)
Genome browser
AA seq
965 aa
AA seq
DB search
MASPDKPWRAEYAKSSRSSCKSCKSPINKETFRLGKLVQATQFDGVMPMWHHASCILKKT
KQIKSADDVEGLESLRWEDQQKIRKYVESGAGDSTSTSTASSGGNAKLEYGIEVSQTSRA
GCRKCTEKILKGEVRIFSKPEGPGNKGLMWHHARCFLEMSPSTELKSLSGWGSIPDSDQE
ALLPLVKKDPPAAKTAGTKRRKDSDDNEKLKQAKTMSASGALQPCSKDKEMEAQSKELWN
LKDDLKKHVTTAELREMLEINEQSTRGSELDLRDKCADGMMFGPLALCPVCSGHVSFSGG
IYRCNGYISEWSKCSHATSDPNRIKGKWKIPEETENQFLVKWNKSQKSAKPKRILNPISP
AETSQGQGSKAAADSSRSEKLDDLRVSISGSSKERQAWKKKIEEAGAEFHAKVKKGTSCL
VVCGQTDMEDAETRKARRMKVAIVREDYLVDCFKKQRKLPFDKYKIEDAGEGMVTVKVKG
RSAVHEASGLQEHCHILEDGNSIYNTTLSMSDLSTGINSYYILQIIQEDKGSDCYVFRKW
GRVGNEKIGGNKLEEMSKSDAVHEFKRLFLEKTANTWESWEQKTNFQKQPGKFLPLDIDY
GVNKQVAKKEPVQTISKLATPLVELMKILFDVETYRTAMMEFEINMSEMPLGKLSKHNIQ
KGFEALTEIQKLLTESDPQPSIKENLLVDASNRFFTMIPSVHPHIIRDEDDFKSKVKMLE
ALQDIEIASRLVGFDADSTESLDDKYTKLHCDISPLSHDSEDYRLIEKYLNTTHAPTHTE
WSLELEEVFALEREGEFDKYAPHREKLGNKMLLWHGSRLTNFVGILNQGLRIAPPEAPAT
GYMFGKGIYFADLVSKSAQYCYTSKENPVGLMLLSEVALGEIHELTKAKYMDKPPRGKHS
TKGLGKKVPQDSEFAKWRDDVTVPCGKPVPSKAKASELMYNEYIVYNTAQVKLQFLLKVR
FKHKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggctagcccagataagccgtggagggctgaatatgcaaagtcgtcgaggtcttcgtgc
aagtcttgcaagtcccccattaacaaggagaccttccgtcttgggaagcttgttcaagct
actcaattcgatggtgtcatgcccatgtggcaccacgcttcttgtatactgaagaaaacg
aagcagattaaatcagctgatgatgttgaaggcttagaatcgcttcgttgggaagatcag
caaaagataagaaaatatgtcgaatctggagcaggggatagcacgagcactagcacagcc
agcagcggtggcaatgccaagctagaatatgggattgaagtttcacaaacctctcgtgct
ggttgcagaaaatgtaccgagaaaatcttgaaaggagaggttcgtatattctctaagcct
gaaggaccgggtaataagggtttgatgtggcaccacgcaagatgtttccttgaaatgtct
ccatctactgaactgaaaagtttgtctgggtggggaagcatacctgactccgatcaagaa
gctcttcttcccttggtgaagaaagatccaccagcagccaaaactgcaggtacaaaaaga
agaaaggattctgatgacaatgagaagttgaaacaagctaagactatgtctgcaagcggt
gctttacaaccttgtagcaaagacaaggaaatggaggcacaaagtaaggaactgtggaac
ctgaaggatgacctgaaaaaacatgtgacaacagctgagctgcgggaaatgcttgaaata
aatgaacaaagtacaagaggatcagaacttgatctgcgcgataagtgtgctgatggcatg
atgtttggtccactcgctctctgccctgtttgctctggtcatgtttctttttccggagga
atttaccgatgcaatggttacatttcggaatggagcaaatgttctcatgccacttctgat
ccaaaccgcatcaaagggaagtggaaaatccctgaagaaacagaaaatcagttccttgtg
aagtggaataagtctcaaaagagtgcgaagccaaaacgtattttgaaccctatatcaccc
gctgaaacatcccaaggtcaaggttctaaagctgcagctgactcctcaaggagtgaaaag
ctggatgatcttagagtttcaatttccggatcctctaaggaacgccaagcatggaagaag
aaaattgaggaagccggtgcagaatttcatgctaaagttaaaaaaggtacaagctgtttg
gttgtctgtggccagacagatatggaagatgctgaaacgagaaaggcaaggaggatgaaa
gtggcaatcgttagagaggattatttggttgactgtttcaaaaagcagaggaagcttcca
tttgacaagtacaaaattgaagacgctggtgagggcatggtcactgtgaaagtaaaaggg
cgaagtgcagtgcatgaagcgtctggcctccaagagcactgccacatccttgaagatggg
aacagtatctataacacaactctgagcatgtctgatctttccaccggcatcaatagttac
tacatactccagataatccaagaagataaaggttcagattgctacgtgttccgtaaatgg
ggcagagttggtaatgaaaagattggaggtaacaaactagaagagatgtcaaagtctgat
gcagttcacgaattcaaacgtctatttcttgaaaagactgcaaacacatgggaatcttgg
gaacaaaaaacgaatttccagaagcaacctgggaaatttcttccactggacattgattat
ggagtaaacaagcaagtagcaaaaaaagagccagttcagaccattagcaaacttgctact
ccattagtagaactgatgaagattctttttgatgtggaaacataccgaactgctatgatg
gagttcgagataaacatgtccgagatgccacttgggaaacttagcaaacataatatacag
aagggttttgaggcattgacagagatacagaagctgttgactgaaagcgacccccagcct
tctatcaaagaaaacttgcttgttgatgctagcaatagattttttacgatgatcccttca
gttcatcctcatattatccgagatgaagatgactttaagtcgaaggtgaaaatgctcgag
gcgctgcaggatatcgaaatagcttcaagattagttggctttgatgctgacagcactgaa
tctctggatgataaatatacgaaattgcattgcgatatttcaccactttctcatgatagt
gaggattatcggttgattgagaagtatcttaacacaactcatgccccaacacatacggag
tggagccttgaactggaggaagtttttgccctcgaaagagaaggagagtttgataaatat
gctcctcacagggaaaaacttggcaataagatgctcctatggcatggttctcgcttgacg
aattttgttggaattctgaaccaaggactgagaattgcgcctccagaagctcctgctact
gggtacatgtttggcaaggggatttactttgctgaccttgttagtaaaagtgcccagtac
tgctacacatctaaggaaaacccggtgggtctaatgcttcttagtgaagttgcattggga
gaaatacatgagctaacaaaagccaagtacatggataaacctccgagggggaaacactcg
accaaagggcttggcaagaaagtgcctcaggattcagagtttgccaagtggagagatgat
gtgacagttccctgtggaaaacctgttccatcgaaggccaaggcttctgagcttatgtac
aacgagtatatcgtctacaatacagcccaggtgaagttgcagttcttgttgaaagtacgg
ttcaagcacaagagatga
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