Raphanus sativus (radish): 108813777
Help
Entry
108813777 CDS
T06014
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1
KO
K25869
zinc finger protein IDD1/2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108813777
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108813777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
108813777
NCBI-ProteinID:
XP_018441934
UniProt:
A0A6J0K4M6
LinkDB
All DBs
Position
6:complement(39384162..39388898)
Genome browser
AA seq
456 aa
AA seq
DB search
MPVDLDNSSTVSGEASVSSTGNQQNPLPKSAAKKKRNLPGMPDPDSEVIALSPKTLLATN
RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSSKEVKKKVYVCPETSCVHHDPSRALG
DLTGIKKHFCRKHGEKKWKCDKCSKRYAVVSDWKAHSKICGTKEYKCDCGTLFSRRDSFM
THRAFCDALAEESVRNHTHSKKQSPEILTRKKHVPDPESLTGSNPTASSVAPVETRSAKI
ISPRAINTKRPESPKTPREILQEAQEPTGGLNGVFFESSSASPSIYASPSCSQSLFAPSS
SIEPIALGLSASHGPSFLCSTRFPAQPAMSATALLQKAAQMGAASSGGSLLRGLGIVSST
SPSVDSLVPNGLALGLPCGGESSSGLKELMMGNSSVFGPKQTTLDFLGLGRAVGNGGGGG
GGPGSTLIGPRGSSIDALATFGSGEFSGHDIGRRTS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgccggtagatttagacaactcctccacagtctccggcgaagcaagtgtctcctccacc
ggaaaccaacaaaacccacttcccaaatccgccgctaagaagaaacgaaacctccctggc
atgcccgatccagactcagaagtcatagctttgtcaccgaagactttactagcaacaaac
agattcgtctgcgaaatctgcaacaaaggcttccagagagaccagaacctccagcttcac
cgtcgtggccacaacttaccctggaaactcagacagaagtccagcaaagaagtcaagaaa
aaggtctacgtctgtcccgaaaccagctgcgttcaccacgacccttcacgcgctctagga
gatctcaccgggatcaagaaacacttctgtcggaaacacggcgagaagaagtggaaatgc
gacaaatgctccaagagatacgctgtcgtgtctgattggaaagctcattctaagatttgt
ggtaccaaagagtataaatgcgattgtggtactctgttttctaggagagatagctttatg
acgcatagagctttctgtgatgcgttggctgaagaaagtgtgagaaaccatactcatagt
aagaagcagagccctgaaatcttgacccggaaaaaacatgtacccgacccggagtcttta
accgggtctaatcctacggcttcctcggttgctccggtggaaactcggtctgctaagatt
atatctcctcgtgctataaacactaagcgaccagaatctccaaaaacccctcgtgaaatc
ttgcaagaagctcaagaaccaacaggtggtttaaacggtgttttcttcgagtcttcatca
gcttctccaagcatatacgcgtctccttcttgctcacagtctctattcgcgccatcttca
tccatcgaaccaatcgctttgggtctctcagcgagtcatggaccatcttttctctgctca
acacggtttccagctcagcccgcaatgtcagctaccgctctgcttcaaaaggcagcgcaa
atgggagcagcttcttcaggtggttcactgcttcgcgggttaggcatagtttcgtcaact
tcaccttctgtggactcactagtccccaatggtctagcattgggactgccttgtggaggt
gaaagcagctcgggtttgaaagagcttatgatggggaattcatctgtgtttggtccgaaa
caaacaacgttagactttctcgggttaggtagagcggttggtaacgggggtggtggtggc
ggtggtcctgggtccactctgattggaccaagaggcagcagcatcgatgcgttggcgaca
tttgggtcgggagagttttcaggacatgacattggtagaagaacatcataa
DBGET
integrated database retrieval system
