Raphanus sativus (radish): 108813779
Help
Entry
108813779 CDS
T06014
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108813779
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108813779
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108813779
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108813779
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Helicases
108813779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
108813779
NCBI-ProteinID:
XP_018441935
UniProt:
A0A6J0K1V1
LinkDB
All DBs
Position
6:51008081..51010916
Genome browser
AA seq
622 aa
AA seq
DB search
MSKRTQQTARETKQEAKDGNKAKNGLFASCSFSSLGLDPKLSDQLQERMGFEAPTHVQAQ
SIPFILSGRDVLVNAATGTGKTIAYLAPIIHHLNASSPKVDRSHGTFALVIVPTRELCLQ
VYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHK
NLRWVIFDEADCILEMGYGKETEQIIKLLGSRQHEEGDEEDEDDDIVVTKGAAQKQTLLL
SATLNEKVNRLAKLSLDDPVMIGLDNSKLLQQKLPPIESPASPDSDEDDEMVIHVNKSAN
PSSEDYGIPSQLVQKYVKVPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFHHSL
LSEFQWPPKSETQQEEEEATTTKQLFLKCKTFRLHGSMEQEDRRSAFANFKAERQALLLS
TDVAARGLDFPKVRCIVQYDCPGEATEYVHRVGRTARIGEKGEALLFLQPVEIDYLKDLK
KHGATLAEYPLLKVLDKFPLLGNMPRVKKVISLESHPWVISLQRGLEFFTYADPKMKNLA
KNAFVSWVRGYAAHKGELKSIFVVKKLHLGHVAKSFALKEQPSLVGKSHHKETMKRKRDE
RHKGQHPKKRKKMSGNRSTTKT
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagaacccaacaaacggcgagagagacaaagcaagaagctaaagatggaaac
aaagccaagaacggtttattcgcctcttgttccttctcttcccttggactagatcccaaa
ctctctgaccagctccaagaaaggatgggttttgaagctccaacgcatgtacaagctcaa
tctattccttttatcctctccggtcgagatgtacttgttaatgctgcaaccggaactggg
aaaactatagcctacttggcaccaatcatacatcacttgaacgcttcttctcccaaggtt
gatcgttctcatggcacttttgctttggtgattgtgccaacacgggagctttgtcttcaa
gtgtacgagactttggagaagctcctgcatcggttccattggattgtccctggttatgtc
atgggtggcgagaagaaggctaaagaaaaagctaggttaaggaaagggatatctattctg
attgcaaccccaggacggcttcttgaccatttgaagaacacagcttcattcgtgcacaag
aatcttcgctgggtcatctttgatgaagctgactgcattctcgaaatgggttacgggaag
gagacggagcagatcattaagcttctaggttcgagacaacacgaggaaggggatgaggaa
gacgaagacgatgatattgttgttacaaagggtgctgctcagaagcagaccttgcttttg
tcagcaacgctgaacgagaaagttaaccgccttgcaaaacttagtctggatgatccggtt
atgattggtcttgacaacagcaaattgctgcaacagaagctaccaccaatagagtctccc
gcctctcctgattccgatgaagatgatgaaatggtgattcacgtgaacaaatcagctaat
ccttcgtctgaggactatggaataccatcgcagcttgtgcagaaatatgttaaagtccca
tgtggtgcacgtcttgtggcacttctctctgttctcaagaacctctttgagagagaagct
tctcaaaaggtggtcgtgttcttttcgacacgtgacgctgtagattttcatcactcactt
ctaagtgaattccagtggccaccaaagtcagagacgcaacaagaagaggaggaggcgacg
acgacgaagcagctgtttctgaagtgcaaaacgttccggttacatggaagtatggagcag
gaggatagaagatctgcgtttgccaacttcaaagcagagagacaagcccttctcttgagt
acagatgttgctgccagaggattggacttcccaaaagtaagatgtattgttcaatacgac
tgtcccggggaagctaccgagtatgtgcatagagtgggtagaacagctcgtattggtgaa
aagggagaagcgttgttgtttctacaacctgttgagatagactatcttaaggaccttaag
aaacatggtgcaacacttgcagagtatcctcttctaaaagtacttgataaatttcctctg
ctcggcaacatgcctcgcgtcaagaaggttatatctcttgaatcacatccctgggtcata
tctctgcagagaggtcttgagttctttacttacgctgatccgaagatgaagaacctggcg
aagaacgcgtttgtctcttgggtcaggggatatgcagctcacaagggagagctcaagagc
atctttgtggtgaagaagcttcacttgggtcatgtcgccaagagctttgctcttaaagag
cagccttctttggttgggaaatcacaccataaggaaactatgaagaggaagagagacgaa
cgccacaaggggcagcacccaaagaagagaaagaagatgagtggcaatagaagtacaaca
aaaacttga
DBGET
integrated database retrieval system
