Raphanus sativus (radish): 108813785
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Entry
108813785 CDS
T06014
Name
(RefSeq) ABC transporter B family member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108813785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108813785
04147 Exosome [BR:
rsz04147
]
108813785
04090 CD molecules [BR:
rsz04090
]
108813785
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108813785
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108813785
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108813785
CD molecules [BR:
rsz04090
]
Proteins
108813785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_16
RsgA_GTPase
Zeta_toxin
AAA_5
AAA_21
DUF87
AAA_15
nSTAND1
DUF815
G-alpha
DEAD
AAA_30
SbcC_Walker_B
DLIC
Motif
Other DBs
NCBI-GeneID:
108813785
NCBI-ProteinID:
XP_056845643
UniProt:
A0A9W3C2E8
LinkDB
All DBs
Position
6:complement(53309351..53315137)
Genome browser
AA seq
1288 aa
AA seq
DB search
MASESGLNGDSNIVEEVSETKRSRNEDKEVKKTEKKEDHEETKTVPFYKLFAFADSFDFL
LMILGTLGSIGNGLGFPIMTILFGDLVDAFGENQTDSNVADKVSKVSLKFVWLGIGTFAA
AFLQLSGWMISGERQAARIRSMYLKTILRQDIAFFDVDTNTGEVVGRMSGDTVLIQDAMG
EKVGKAIQLLATFVGGFVIAFIRGWLLTLVMLSSIPLLVMAGAGLAIVIARTASRGQTAY
AKAAVVVEQTIGSIRTVASFTGEKQAISNYNKHLVTAYKAGVMEGGSTGLGLGTLFLVVF
CSYALAVWYGGKLILDKGYTGGQVLNIIISVLTGSMSLGQASPCLTAFAAGQAAAYKMFE
TIERRPDIDSYSTDGKVLDDIKGDIELKDVYFTYPARPDEQIFRGFSLFISSGTTVALVG
QSGSGKSTVVSLIERFYDPQAGEVLIDGVNLKEFQLKWIRSKIGLVSQEPVLFTSSIKDN
IAYGKEDATIDEIKAAAELANVSKFVDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILK
DPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNADTIAVIHQGKIV
EKGSHTELLKDPEGAYSQLIRLQEEKKHEENPADEHKMSSLESFKQSSFRKSSLGRSLSK
GGSSRGNSSRHSFNMFGFPSGIEGSDVAQDQEEVDTTVPKTKPKKVSIRRIAALNKPEIP
VLILGTISAAANGVILPIFGILIASVIKAFFKPPKELKEDTSFWAIIFMVLGFASVIAYP
AQTFFFAIAGCKLVQRIRSMCFEKVVHMEVGWFDEAEHSSGTIGARLSADAAAIRGLVGD
ALAQMVQNLSSILAGLIIAFLACWQLAFVVLAMLPLIALNGFLYMKFMKGFSADAKKMYG
EASQVANDAVGSIRTVASFCAEDKVMNMYTKKCEGPMKTGIRQGIVSGIGFGVSFFVLFA
SYATSFYVGAKLVDDGKTTFDSVFRVFFALTMAAIAISQSSSLSPDSSKADIAAASIFGI
IDRESKIDPSVESGRVLDTVKGDIELRHVSFKYPSRPDVQIFQDLCLSIRAGKTVALVGE
SGSGKSTVIALLQRFYDPDSGEITLDGVEIKTLRLKWLRQQTGLVSQEPILFNETIRANI
AYGKGGDASESEIVSAAELSNAHGFISGLQQGYDTMVGERGIQLSGGQKQRVAIARAIVK
DPKVLLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIV
EKGKHESLINIKDGVYASLVQLHLSAAS
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagagagcggcttaaacggagattcgaatatagtagaagaggtttctgagacc
aaaagaagcagaaatgaagacaaagaagtgaagaaaacagagaagaaagaagatcatgag
gaaacaaaaacggtgccgttttacaagctatttgcttttgcagattcttttgacttccta
ttgatgatcctggggacgcttggatctattggaaacggtctcggcttccctattatgact
atactgttcggagatctagtagatgcttttggagagaaccagactgactcaaatgttgcc
gacaaagtctccaaagtatctttgaagtttgtctggcttggaatcggtacttttgcggct
gcttttctccagttgtctggttggatgatctctggagaaagacaagcagcgagaataaga
agcatgtatctaaagacaatattaagacaagatatagctttcttcgacgttgatacaaat
acaggtgaagtcgttggaagaatgtctggtgacactgtactaatccaagatgccatggga
gagaaggtggggaaagctatacaacttctagcaacatttgttggaggctttgtgatagct
ttcataagaggatggcttctaactttggtcatgttatcttcaatacctcttcttgtaatg
gctggtgcgggtctggctatcgtcatcgctagaacagcttctcgtggacaaaccgcttat
gctaaagctgctgttgtagttgagcaaacaatcggttccataagaacggttgcttcgttt
acgggagagaaacaagctataagcaattacaataaacatcttgtcactgcttacaaagca
ggagtcatggaaggtggttcaactggattaggacttggaacactctttcttgtagtgttt
tgtagctacgctttagcggtttggtatggaggaaagttgattcttgataaagggtacaca
ggaggacaagttctcaacatcatcatctctgttttaactggatccatgtcgttaggtcaa
gcatctccttgtttaaccgcgtttgcagctggacaagctgctgcttacaagatgtttgag
acaatagagagaagacctgacattgactcttatagtacagatggtaaagtgttggatgac
atcaaaggagacattgagcttaaagatgtctacttcacttaccctgcaagaccagacgag
cagattttccgcgggttttcgctgtttatctcgagtggaacaaccgtggctttagttggg
cagagtgggagtgggaagtctactgttgtgagtctaatagagaggttttacgatccgcaa
gccggtgaagttctcatagatggtgttaacctaaaagagtttcagctcaaatggatcaga
agcaagatagggcttgtgagtcaagaaccggttctgttcacttcaagcatcaaggacaac
atcgcttacggtaaagaagacgctacaatagacgagatcaaagcggctgcagagcttgca
aacgtttccaagtttgttgataagctccctcagggtttggatacaatggttggagagcac
ggcactcagctttcaggagggcagaaacagaggatcgctgtggcaagagccattctaaaa
gatccgagaatcttgcttttggacgaagcaacaagcgcgcttgatgcagagtcagagaga
gtggttcaagaagcgctcgataggatcatggttaaccggactacagttgtggttgctcac
cggttaagcacggtgagaaacgctgatacgatagctgtgattcaccaaggaaagattgtg
gagaaaggctctcacactgagctactaaaggacccggaaggagcttactctcagctcata
cgtcttcaagaagagaagaaacacgaagagaatccagcagatgagcataagatgtcatca
ttagaatcatttaagcaatctagtttcagaaaatcgtctctaggaaggtcactaagcaaa
ggaggatcatctagaggaaacagcagcagacattctttcaacatgtttggtttcccatca
gggatcgaaggaagcgacgtcgctcaagatcaagaagaggttgatactacagtgcccaag
accaaaccaaagaaagtatctatccgtagaatcgctgctctaaacaaaccggagattcct
gttctcatactaggaaccatatcagcagcagcaaacggtgttatacttcctatattcggt
atactaatagcaagcgtgatcaaagcgtttttcaaaccgcctaaggagctaaaagaggac
acgagcttctgggccattatattcatggttcttggttttgcttcagtcattgcctacccg
gctcaaaccttcttcttcgctatagctggatgtaagttggtgcagaggataagaagcatg
tgttttgagaaagtggttcacatggaagttggatggtttgatgaggcagagcattctagt
ggaaccattggtgcaaggctatcggctgatgcggctgctatacgtggtctagtgggagat
gctttggctcagatggttcagaatctttcttcaatattggctggtttgatcattgccttc
ttggcttgttggcagctagctttcgttgttcttgccatgcttcctcttattgcacttaat
gggtttctttacatgaagttcatgaaaggtttcagcgcagatgcaaagaaaatgtatggg
gaagcgagtcaggtggcgaatgatgctgttggaagcataagaacagttgcttcattctgt
gcagaagacaaagtgatgaacatgtacacaaagaagtgtgaaggacctatgaagacaggg
atacgtcaaggcattgtcagtggaataggcttcggtgtatctttctttgtactcttcgct
tcttacgcgaccagcttctatgtgggggcaaaacttgtcgatgacggcaagacaaccttc
gactctgttttcagggttttctttgctttgacgatggcggctattgcgatatctcaatca
agttcgttatctcctgattcaagcaaagctgacatagctgctgcttcgattttcgggatt
atcgacagagaatcaaagattgatccaagtgtagagtctggaagagtgttggatactgtt
aaaggagacattgagcttcgtcatgttagtttcaaatacccatcaaggcctgatgttcaa
atcttccaagatctttgtctaagtatccgagctggaaagaccgttgctttggttggagaa
agcgggagcgggaagtcaacggtgatcgctttgcttcagaggttttatgatccagactcg
ggtgagatcactctcgacggtgtagagatcaagaccctgcgactaaaatggcttagacaa
caaacaggactcgtgagccaagaaccgatcttgtttaacgaaacgatcagagccaacatt
gcttatggaaaaggcggagacgcgagtgaatcagaaatagtatctgcagctgaactatca
aacgcccatggttttatcagtggtctacaacagggttacgatacaatggtgggagaaaga
ggaatacagttatcaggcgggcagaaacaacgagtggctatagctagagccatcgtcaag
gatcctaaggtattgctacttgacgaagctactagtgctctcgacgctgagtctgaacgt
gtggttcaagatgctcttgaccgggttatggtaaaccgaactacaattgtggtggctcac
cggttatcgacaattaagaacgctgatgtaattgcagtcgttaaaaacggagttattgta
gagaaagggaagcacgagagtttgatcaatatcaaagacggagtttatgcttcgttagtg
cagcttcatctcagtgccgcttcttaa
DBGET
integrated database retrieval system
