KEGG   Raphanus sativus (radish): 108814144
Entry
108814144         CDS       T06014                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108814144
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108814144
Enzymes [BR:rsz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108814144
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108814144
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    108814144
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_5 ResIII zf-rbx1 zf-RING_UBOX GNT-I DEAD zf-ANAPC11 Prok-RING_4 RING_XB3-XBAT31 zf-Nse AAA_34 zf-RING_10 zf-C3HC4_4
Other DBs
NCBI-GeneID: 108814144
NCBI-ProteinID: XP_018442149
UniProt: A0A6J0K586
LinkDB
Position
7:complement(6069666..6072723)
AA seq 849 aa
MANEDDFPSSSAEPPPSQQSQDDNISERYMVGFVIANIVGLKYYSGRINGRELVGLVREP
SNLYDENAIRVLNTRSVQVGHIERAVAAVLSPLIDSEKILVEGIVPNTRSSANRFRIPCQ
VHIFAKLEETQAVKSEISRGGLVLISDSDVSFGLSEAVVVKERMGGGEGKKKSVDKIFEL
VDENVKGKEKMVEVEPPRGVIKSELFAHQKEGLGWLMNREKPEELPPFWEEKKGGDFVNV
LTNYRTDKRPEALRGGVFADDMGLGKTLTLLSLIAFDRYGNASTSTGTEEEEETFDVEKK
GRKRGRGKGSESGARKKVKSVSQKTTLIVCPPSVFSAWVTQLEEHTVPGSLKVYMYHGGE
RTDDVNELMKYDIVLTTYGTLAVEEAWEDSPAKKMEWLRIILDEAHTIKNANAQQSRAVC
NLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKNGLSRLQ
VLMGTISLRRTKEKSLIGLPPKTVGTCYVELSAEERQLYDHMEGEAKGVVQNLINSGSLM
RNYSTVLSIILRLRQLCDDVSLCPPELRSLTTCTSIEDVTDNPELLQKLVAILQDGEDFD
CPICISPPRDMIITRCAHIFCRACILQTLQRTKPSCPLCRGSLTQSDLFNAPPPPPPSDT
QDNDGGDTKPSTKSSKVTALLSLLMASKQEDPNTKSVVFSQFRKMLLLLEVPLKAAGFTV
LRLDGAMTVKKRTQVIGDFGKPELTGPVVLLASLKASGAGINLTAASRVYLFEPWWNPAV
EEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAFKRRRGKDQREVNI
EDVISLMSL
NT seq 2550 nt   +upstreamnt  +downstreamnt
atggcgaacgaagacgacttcccctcctcctccgcggagccgccgccgtcgcagcaatcc
caagacgataacatctcagagcgatacatggtgggattcgtaatcgcgaacatcgtaggg
ctaaagtactactcgggacgaatcaacggccgagagctggtgggcctggtccgagagccc
tcgaacctctacgacgagaacgcgatcagggtgctcaacactcgatccgtccaagtgggc
cacatcgagcgcgccgtggccgccgtcctctcgccgctgatcgactccgagaagatcctc
gtcgaaggcatcgtgcccaacactcgctcctccgccaacaggttcagaatcccctgccaa
gttcacatctttgcgaagctggaagagacgcaagctgttaaatcggagatttcgaggggt
gggttggtgttgatttcggattcggatgttagtttcggtttgtctgaggctgtggtggtg
aaggagcggatgggtggtggagaggggaagaagaagagtgtagataagatttttgagctt
gttgatgagaatgttaagggaaaggagaagatggttgaggttgagccgcctaggggagtg
ataaagtctgagcttttcgctcatcagaaggaagggttgggatggttgatgaacagggag
aagcctgaggagcttcctccgttttgggaagagaagaaaggtggagactttgtcaacgtt
ttgacgaattaccgcacggataagcggcctgaggctttgcgtggaggagtttttgctgat
gacatggggttgggtaagactcttactctgctttcgttgatagctttcgatagatacggc
aacgcatccaccagtacgggaactgaagaagaagaagagacttttgatgttgaaaagaag
ggtaggaagagagggagaggcaaggggagtgagagtggagctcggaagaaggttaagtcc
gtgtctcaaaagacgacgttgattgtttgtccaccttctgtgttttcagcgtgggttact
cagctagaagagcatactgtaccggggagcttgaaggtgtacatgtaccacggtggcgag
aggacggacgacgttaacgagcttatgaagtatgatatagtgttgactacttacggcact
ttggctgttgaggaggcgtgggaagattctcctgctaagaagatggaatggctgagaata
attctggatgaggcacacaccatcaagaacgcaaatgctcagcagagccgggcggtttgt
aatctgaaggcttctaggagatgggctgtcacaggcactcctattcagaatggttcgttt
gatctctactctctgatggcgtttctccggttcgagccattttccataaagagttattgg
caaagcttgatacagcgcccgcttggtcaagggaataagaatgggctttcacgtttacag
gttttgatggggacaatctcgttgcggagaacaaaggaaaagagtttgattggtttgcca
cctaagactgttgggacttgttacgttgaactctctgcagaagaacgtcagttgtatgat
cacatggaaggagaagccaaaggtgttgtgcagaaccttataaacagtggaagcctgatg
agaaactactcaacagttttgagtataatcttacggcttagacagctttgtgacgatgtt
tctctatgccctccggagttgagatctttgaccacttgtacatctatagaagatgtgact
gataacccagagctgctgcagaagctggttgctatattgcaagatggggaggattttgac
tgtcctatttgcatttctccaccaagggacatgatcatcactcggtgtgctcatatcttt
tgcagggcatgcattctccaaacccttcaaagaaccaaaccttcttgccctctttgccgt
ggctctctaacccaatccgatctcttcaacgctcctcctcctcctcctccctcggatact
caagataatgacggaggagacaccaaaccttcaaccaaatcctcaaaggtcacggcgtta
ctatcgcttctcatggcatcgaaacaagaagaccccaacacaaagtctgttgtgttctct
cagttcaggaagatgctgcttctactagaagtcccactgaaagctgcgggtttcaccgtc
ttacggttagatggggcaatgaccgtgaagaaacggacgcaagtcattggagacttcggg
aaaccggagttaaccggacctgtggtgttgcttgcaagcctcaaggcctctggtgctggc
ataaacttaactgcagcctcgagagtttacctgttcgagccgtggtggaaccctgcagtt
gaagaacaggccatggacaggattcataggattgggcagaaacaggaggttaagatgatt
aggatgattgcgaggaacagtatcgaggagagggtccttgagcttcagcagaagaagaag
aatcttgcaaatgaagcttttaaaagaaggcgtgggaaagatcaaagagaggttaacatt
gaagacgtgatctctctcatgtctctctga

DBGET integrated database retrieval system