Raphanus sativus (radish): 108814155
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Entry
108814155 CDS
T06014
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108814155
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108814155
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108814155
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
108814155
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (U)
108814155
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108814155
Prokaryotic type
108814155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Cas_Cas02710
Motif
Other DBs
NCBI-GeneID:
108814155
NCBI-ProteinID:
XP_018442162
UniProt:
A0A6J0K3D2
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Position
7:complement(2561949..2566040)
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AA seq
592 aa
AA seq
DB search
MPTVGVGRDRLFAALGETYTQEEFEDLCFRFGIELDDVTTEKAIIRKEKHIEEEAKDDEE
TIYKIDIPANRYDLLCLEGIAQALRIFNKKQEIPTYSLSHIPKDKMLKMTVRSDQTSQIR
PYVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTYEALSP
KDINFVPLKQTKSFRGDELIEFYKSDLKLKKYLHIIENSPVFPVLYDSKRTVLSLPPIIN
GAHSAISLQTKNVFIECTATDLTKAKIVLNTMVTTFSEYCEKKFEIEPVEVTYDNGQSYI
YPDLAVYDMDVPLSYITDLMGVSLEVEEVTSLLNRMQLRAERSTSSEGQCLVKVHVPPSR
SDVLHPCDVMEDVAIAYGYNNIPTRMPASIKPLPLNELSDLLRLEIAMNVYTEVLTWILC
SHKENFALLNREDDNSGVIIGNPRGADFEAVRTRLMPGILKTVGSNNKHPKPIKIFEVGD
VNLLDETKDVGASNRRHLAALHCGATSGFELIHGLVDRIMEVMGVPFKPEGDIIGYHIKR
SEEPEFLPGRQASIICKGKHVGNFGIVHPEVLINFDITDPCSFVEIDIEALL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcctacggttggtgtcggtagagaccgtttgttcgctgctcttggagagacctacact
caggaagagtttgaggatctgtgtttccgtttcggtattgagcttgatgatgtgactact
gagaaagcaataatcaggaaggaaaaacatatcgaagaagaagctaaggatgacgaagag
accatctacaagattgatattcctgccaacaggtacgatttgctctgccttgaaggtatt
gctcaagctcttcgcattttcaacaagaagcaggagattccaacctacagcctttctcac
atccccaaggacaaaatgcttaagatgactgttagatctgatcagacatctcagattcgc
ccttatgttgtctgtgctgtgttaagaggggtaaccttcgatgaggctcgttacaacagc
ttcatcgatcttcaggacaagctccatcagaacatttgcaggcgaagatccctggttgct
attggaactcatgacttagatacattacagggtcctttcacatatgaggctctgtcgcca
aaggatataaattttgtccctttgaaacaaactaagagcttcaggggtgacgaactaatt
gaattctacaagtccgatttgaagttgaagaagtatctacacattattgagaattcaccg
gtcttccctgttttatacgacagtaaaagaacggtgttgtcattgccacctattatcaat
ggtgcacattcagcaattagcctgcagacaaagaatgtcttcattgagtgcacagcaact
gatttgaccaaggccaagatcgttttgaatacaatggttacaaccttttctgaatattgt
gagaagaaatttgagattgagcctgttgaggttacatatgacaacggacagtcatacatt
tatcctgatctagctgtctacgatatggatgttcctctctcttatatcactgacttaatg
ggagtctctttggaggtggaagaggttacaagtctgctgaaccgaatgcagttgcgcgct
gagcgatcaacgtctagtgagggccaatgtctcgtaaaggtgcatgtacccccaagcaga
agcgacgtgctccacccttgtgatgttatggaggatgtcgccattgcctatggttacaat
aacatcccgacaagaatgcccgcttcgattaaaccgctgcctttgaatgagctcagcgat
cttctcagattagagattgcgatgaatgtgtacaccgaggttctgacatggatactgtgc
tcacacaaggaaaacttcgcattactgaatagagaagatgacaattcaggtgttattatt
gggaacccacggggtgctgatttcgaggctgtaagaacgaggctaatgcctggaatactg
aagacagttggttctaacaataagcaccctaaacctatcaagatttttgaagtaggtgac
gtgaacttattggatgaaacaaaagacgtcggtgcatccaatcgccgccatctcgctgca
cttcactgtggtgctacttctggatttgagcttatacatggtctcgtcgatagaatcatg
gaagtaatgggagtcccatttaaaccagagggtgacattataggataccatataaaacgc
tctgaagaacctgagttcttacctggtagacaagccagtatcatttgcaaagggaaacat
gttggtaacttcggaatagttcatcctgaggttttgatcaactttgacatcactgatcca
tgctctttcgtggagattgacatcgaagctctcctctag
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