Raphanus sativus (radish): 108814406
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Entry
108814406 CDS
T06014
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108814406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
108814406
Ion channels [BR:
rsz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108814406
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Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
108814406
NCBI-ProteinID:
XP_018442471
UniProt:
A0A6J0K4T6
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Position
7:2933469..2936887
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AA seq
714 aa
AA seq
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MNKLRSLRCLLPETITSAAASNRGSVAGYYGSQVLPWRHQILDPDSNIVTYWNHIFLVTS
ILALFLDPFYFYAPYVGGPACLSVDVGLAATVTFFRSVADIFHLLHIFMKFRTAFVARSS
RVFGRGELVRDPREIAMKYLKSDFIVDVAAMLPLPQLVIWLVIPAATNGTANHANSTLAL
IVLVQYIPRSFIIFPLNQRIIKTTGFIAKTAWAGAAYNLLLYILASHVLGAMWYLSSIGR
QFSCWSKVCEKDHALRVLDCLPSFLDCKSLEQPERQYWQNVTQVLSHCDATSSTTNFKFG
MFAEAFTTQVATTDFVSKYLYCLWWGLRNLSSYGQNITTSVYLGETLFCITICIFGLILF
TLLIGNMQTSLQSMSVRVEEWRVKRRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVD
EESILQSLPTDLRREIQRHLCLALVRRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFRE
GDPVDEMLFVIRGQIESSTTNGGRSGFFNSTTLRPGDFCGEELLTWALMPNSTLNFPSST
RSVRALSEVEAFALSAEDLKFVAHQFKRLQSKKLQHAFRYYSHQWRAWGACFVQSAWRRY
KRRKLAKELSLHESSGYYYTDETGYNEEENREYYYGSDDDDFEGERLSADNTNNSQNFGA
TMLASKFAANTRRGTHQKASSSSSGGKKDGSSNSLKMPQLFKPDEPDFSMDKED
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctccgatctctccgctgcctcctccccgagaccataacctccgccgccgca
tcgaaccgaggatccgtcgccgggtactacggtagccaagtccttccatggcggcaccag
atcctggacccggacagcaacatcgtcacctactggaaccacatcttcctcgtcacctcc
atcctcgccctcttcctcgatcctttctatttctacgctccttacgtcggcggccccgcg
tgcctctccgtcgacgtcggcctcgccgccacggtcaccttcttccgctccgtggccgat
atcttccacctcctccacatcttcatgaagttcagaacggccttcgtcgcgcggagctct
agagtttttggacgcggcgagctcgtcagggatccgagggagatcgctatgaagtacttg
aagagcgatttcatcgtcgatgtggctgccatgcttcctctcccccagcttgtaatatgg
ctagtaattccagccgcaaccaacgggactgctaatcatgcaaatagcactctcgccctt
atcgttctcgttcagtacattccaagatcattcattatattcccacttaaccaaaggatt
ataaaaacaaccgggttcatcgccaagactgcatgggcaggagctgcgtacaacctcctc
ctctacatactcgccagtcacgtgttgggagcaatgtggtatctatcatcaattgggcgg
cagttctcgtgttggtccaaggtatgcgagaaagatcacgccctgagagttcttgattgt
ctccctagcttcttggactgcaagagtctagagcaacctgagcgccagtattggcagaac
gtcactcaggtcctttctcattgtgatgctacaagcagcaccacaaatttcaagtttggc
atgtttgctgaagcctttaccactcaagtcgctaccacggatttcgtgtccaagtactta
tattgtctttggtggggtttaagaaatctaagttcttatggccagaatataaccacaagt
gtatatcttggcgagaccctgttctgtattacaatttgtatttttgggttgattctcttc
acactcctgatcggtaacatgcaaacatctttacaatcgatgtctgtaagagttgaggaa
tggagagttaagagacgagacactgaagaatggatgagacatcgtcaactacctccagag
cttcaagagcgtgtccgtagattcgttcaatacaagtggcttgcaaccagaggcgtcgat
gaagaatcaatcctccagtctttacctactgacctacgccgcgaaatccaacgccatctc
tgtctcgctcttgtccgcagggtcccgttcttctctcaaatggatgaccaacttcttgac
gctatatgcggatgccttgtctcatctttgagcacggcagggacctacatattccgtgaa
ggtgatcctgttgatgagatgctctttgtgatcagaggacaaatagagagctcaacaaca
aacggaggaagatctggtttctttaactccacgactctaagacctggtgatttctgtggc
gaagagcttcttacatgggccttaatgccaaactctacgcttaattttccgtcttcaacc
cgaagcgtccgtgcgctctctgaggttgaagcttttgccttaagcgcagaggatctcaag
tttgttgctcatcagttcaaacgtcttcaaagcaaaaagctgcaacatgctttcaggtac
tactcacatcagtggcgtgcatggggagcttgttttgtgcaatccgcatggagacgttac
aagcgaagaaagctcgcgaaagagctcagcttgcatgagagtagcgggtactattacaca
gatgagacaggctacaacgaagaagaaaacagagaatactactatggaagcgacgatgat
gattttgaaggtgagagactatctgcggacaacacaaacaacagccaaaactttggagca
acaatgttggcgtctaaattcgcagcaaacacgagaagaggcacacatcaaaaggcttcg
agtagtagtagtggtggtaagaaagatggatcttcgaatagtttgaaaatgcctcaacta
ttcaaaccagatgagcctgatttctcaatggataaagaagattaa
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