Raphanus sativus (radish): 108814489
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Entry
108814489 CDS
T06014
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03420
Nucleotide excision repair
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108814489
09124 Replication and repair
03420 Nucleotide excision repair
108814489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rsz03051
]
108814489
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108814489
Proteasome [BR:
rsz03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108814489
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108814489
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
TECR_N
UBA_Ucp12
UBA_RAD5A
UBA_3
Dsc3_N
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
108814489
NCBI-ProteinID:
XP_018442578
UniProt:
A0A6J0K4J7
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All DBs
Position
7:complement(20874008..20876695)
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AA seq
384 aa
AA seq
DB search
MKVFVKTLKGTNFEIEVNPAETISDTKKRIETLHGAQYPAAQQMLIHQGKVLKDETTLEE
NNVVDNSFIVIMLSKAKVSSSGASTASAPAPAPSATQAQPAQTVATPQVATPTASVPEPT
SGAATVAAPTAAAASTQTDVYGQAASNLVAGNNLESTVQQILDMGGGSWDRDTVIRALRA
AFNNPERAVEYLYSGIPAQAEIPPAPQAPASGGQAANPLAQTQQEAAPVPATGGPNANPL
NLFPQGMPAADAGAGAGNLDFLRNSQQFQALRTMVQANPQILQPMLQELGKQNPQLVRLI
QEHQADFLRLINEPVEGEENVMEQLEAAMPQAVTVTPEEREAIERLEAMGFDRAMVLEVF
FACNKNEELAANYLLDHMHEFEEQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttcgtgaagactctgaaagggacaaacttcgagatcgaagtgaatccggcg
gagacgatctctgatactaaaaaacgtatagaaacgcttcatggtgctcaatacccagct
gctcagcagatgctgattcaccaaggaaaagttctcaaggatgagactacattggaagag
aacaacgttgttgacaacagtttcattgttatcatgttgtccaaggccaaggtttcttca
agcggggcatcaactgcatctgcgcctgcacctgcacctagtgctactcaggctcaacct
gcacagacagtagctacacctcaggttgctactccaactgcctcagttccagagcctaca
agtggagctgcaaccgttgcagcacctactgcagctgctgcttcgactcaaactgatgtt
tatggacaagcagcctcaaaccttgttgctggaaacaacctagagtccactgttcagcaa
attcttgacatgggtggaggaagttgggaccgtgacactgttatccgtgccctgagagcc
gcctttaacaaccctgaaagagctgtcgaatatctgtactcaggaatccctgcacaagct
gaaatcccgccagcccctcaagccccagctagtggtggacaggcagcaaaccctctagca
cagacccaacaagaggctgctccagtgcctgcaactggtggtccaaacgctaatccgtta
aacctctttccccagggcatgcccgctgcagatgctggtgccggagctggtaatcttgat
ttcctgcgtaacagtcaacagttccaagccttgagaactatggtacaagcaaacccgcaa
attctacagcctatgctacaagagctcggtaaacaaaacccgcagcttgtacgacttatc
caagagcaccaggcggacttcctacgcttgataaatgaacctgtcgagggagaagagaat
gtcatggaacagttggaagcagcaatgccacaagctgtcaccgtcacacctgaagagcgt
gaagccattgaacggcttgaagcgatggggtttgatcgtgcaatggtcttagaggtgttc
tttgcgtgtaacaagaacgaagaacttgcagctaactaccttctagatcacatgcacgag
tttgaggaacaatag
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