Raphanus sativus (radish): 108814530
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Entry
108814530 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108814530
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108814530
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108814530
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108814530
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Atypical E3
108814530
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
108814530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
DUF2321
Baculo_IE-1
Spt5_N
SLX1_C
zf-HC5HC2H
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
108814530
NCBI-ProteinID:
XP_018442626
UniProt:
A0A6J0K593
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Position
7:complement(6720857..6722645)
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AA seq
318 aa
AA seq
DB search
MVSLTWKHHTLIQALISRGPLKEKEFESIFTAVTGRNPGGAKKIFDKYLLEINKELSYVH
FELRACRDQYDGQVCYGVVNTVSDDQSKLGTNYSVPQIAFFKGIIEAIAQDEAAQGCISS
FDALNIRLENQLPSEASSSQQQQVPPAFKNFSMSQKDKTLDELVRDKWLCRTREGNIGLG
IRSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPNEGCTVRIHKYCLQNLLSQRDDKVCSG
CGKPWPLGKITKEEAVEAAVDDDEGEEENETQATALRSKKRKQRSQRDSAENVSSQASFA
SSSGNTRRRVTRSAAHLS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggtatcgctgacctggaagcaccacacgctaattcaagctttgatttcgcgaggccct
ctcaaggagaaagagtttgaatccatcttcaccgccgtcaccggcagaaacccaggaggt
gctaagaagatatttgataagtaccttcttgagataaacaaagagctctcttatgtacac
tttgagttgagggcttgtagagatcagtatgatggtcaagtttgttacggagttgttaac
actgtctctgatgatcaatccaaactcggcactaactactctgttccgcagatcgctttc
tttaaaggcattatagaagctattgcacaggatgaagctgctcaaggttgcatatctagc
tttgatgccctcaatatccgattggagaatcagttaccaagtgaagccagcagcagtcaa
cagcagcaagtcccacctgcattcaagaacttttcaatgtcgcaaaaggacaaaactctc
gatgagcttgtaagggacaaatggctttgccgcacaagagagggtaacatcggacttgga
ataagatctcttcttgacctgcgcagctggttcagaaacaatgatgttccctcttgcgag
gtttgcaatgaagctggagttaaggcggatttgtgtccaaatgaaggttgtacggtccgt
atacacaagtactgccttcaaaacttgttatctcaaagggacgataaagtttgttctggc
tgcgggaagccatggcctttgggtaaaattacaaaagaggaagctgttgaagcagcagtg
gatgatgatgagggggaggaggaaaacgagactcaagccacagctttaaggtccaagaaa
agaaaacaaaggagccaaagagactcagctgaaaacgtttcttctcaagcttcttttgcc
tcgagtagtggtaacactaggagaagagtaactcgtagcgctgcacacttgagttag
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