Raphanus sativus (radish): 108814804
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Entry
108814804 CDS
T06014
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108814804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108814804
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rsz03037
]
108814804
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108814804
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
108814804
Chromatin remodeling factors
SRCAP complex
108814804
INO80 complex
108814804
INO80 complex (yeast)
108814804
SWR1 complex
108814804
ASTRA complex
108814804
Cilium and associated proteins [BR:
rsz03037
]
Motile cilia and associated proteins
Dynein assembly factors
108814804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_19
AAA_5
AAA_16
Mg_chelatase
AAA_18
bpMoxR
AAA_25
TsaE
Cdc6_lid
GvpD_P-loop
DnaB_C
AAA_7
Zeta_toxin
nSTAND3
AAA_11
AAA_28
NPHP3_N
IstB_IS21
Rad17
Motif
Other DBs
NCBI-GeneID:
108814804
NCBI-ProteinID:
XP_018442938
UniProt:
A0A6J0K4Q0
LinkDB
All DBs
Position
7:complement(6911775..6914522)
Genome browser
AA seq
458 aa
AA seq
DB search
MEKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIQLAAGFVGQLEAREAAGLVVDMIK
QKKMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKETKDVYEGEVTELSPEETESLTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDKGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGVCNVRGTDIPSPHGVPIDLLDRL
VIIRTQIYNPSEMIQIIAIRAQVEELTVDEECLVLLGDIGQRTSLRHAVQLLSPASIVAK
MSGRDNICKADIEEVTSLYLDAKSSAKLLHEQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtaaagatcgaagagattcagtccaccgcgaagaaacagcggattgctact
cacactcacatcaagggtcttggcctcgagccaaccggaatccctatacaactggcggct
ggattcgtcggtcagcttgaggcgagagaggcagctggtcttgtagttgacatgatcaag
cagaagaaaatggctggcaaggctcttttgctcgctggacctcctggtaccgggaaaact
gcactggctcttggaatatcccaagagctgggaagtaaggttccattctgtccaatggtt
ggatctgaggtttactcatccgaggttaagaaaactgaggttctcatggagaattttaga
cgtgccattgggctacgtatcaaggaaaccaaagacgtctacgaaggagaggttacagag
ctttccccagaagaaactgaaagtcttaccggaggttacggcaaaagcatcagccatgtt
atcattgggctcaagacagtcaaaggaaccaaacaacttaagttggatcccactatctac
gatgccttgatcaaggagaaggtagctgtaggagatgttatatacattgaagcaaacagt
ggagctgtcaagcgggtgggtagaagtgatgcttttgccactgaattcgatctggaagca
gaagaatatgttccacttcccaaaggagaggttcacaaaaagaaagagatagtgcaggat
gtcacgcttcaagatctggacgcagcaaatgctcgacctcaaggtgggcaggatatactt
tccttgatgggccaaatgatgaaacccaggaagactgagatcactgataagctgcggcaa
gaaatcaacaaggtggtgaaccgttatatagataaaggtgttgcagagcttgttcccgga
gttctatttatcgatgaagttcatatgcttgatatggagtgcttttcctacttaaaccgt
gctcttgagagctcgttatctccaatagtgatattcgcaacaaatagaggagtttgcaac
gtaagagggactgatattccgagtccccatggagtccctattgacttgttggatcggttg
gttattatccggacccagatctacaacccctctgaaatgatacagattatagcaattcgt
gcgcaagtagaagagctaacagtagatgaagaatgcttggtcctacttggggacattggg
cagagaacatccctaaggcacgcagttcagcttctgtctcctgccagcatcgtggcgaaa
atgagtggacgtgacaatatatgcaaggctgatatagaggaagtaacatcactctacctt
gacgccaaatcttcagcaaagcttttgcacgagcagcaagaaaaatatatctcatga
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